Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2268690 |
| length | 396 |
| RNA type | TUCP |
| GC content | 0.51 |
| exon number | 3 |
| gene id | cn112 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 42419107 ~ 42454007 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0031966 | mitochondrial membrane | cellular_component |
42,384,000
42,388,000
42,392,000
42,396,000
42,400,000
42,404,000
42,408,000
42,412,000
42,416,000
42,420,000
42,424,000
42,428,000
42,432,000
42,436,000
42,440,000
42,444,000
42,448,000
42,452,000
42,456,000
NC_048589.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2268627 | lncRNA | upstream | 338 | 42418353 ~ 42418822 (+) | True | G1984253 |
| TU2268689 | lncRNA | upstream | 2884 | 42415564 ~ 42416276 (+) | True | G1984304 |
| TU2268676 | lncRNA | upstream | 45703 | 42372685 ~ 42373457 (+) | True | G1984292 |
| TU2268667 | lncRNA | upstream | 68647 | 42350185 ~ 42350513 (+) | True | G1984284 |
| TU2268650 | lncRNA | upstream | 101207 | 42317547 ~ 42317953 (+) | True | G1984269 |
| TU2268704 | lncRNA | downstream | 14167 | 42467990 ~ 42469076 (+) | True | G1984317 |
| TU2268890 | lncRNA | downstream | 173366 | 42627189 ~ 42628064 (+) | True | G1984488 |
| TU2268891 | lncRNA | downstream | 188120 | 42641943 ~ 42642481 (+) | True | G1984489 |
| TU2268894 | lncRNA | downstream | 192718 | 42646541 ~ 42694457 (+) | True | G1984492 |
| TU2268911 | lncRNA | downstream | 228772 | 42682595 ~ 42683324 (+) | True | G1984507 |
| XM_036962558.1 | mRNA | upstream | 1118 | 42284746 ~ 42418042 (+) | False | LOC110504277 |
| XM_036962560.1 | mRNA | upstream | 1118 | 42284746 ~ 42418042 (+) | False | LOC110504277 |
| XM_036962557.1 | mRNA | upstream | 1118 | 42284747 ~ 42418042 (+) | False | LOC110504277 |
| XM_036962559.1 | mRNA | upstream | 1118 | 42284747 ~ 42418042 (+) | False | LOC110504277 |
| XM_036962561.1 | mRNA | upstream | 1118 | 42284747 ~ 42418042 (+) | True | LOC110504277 |
| XM_036962328.1 | mRNA | downstream | 38150 | 42491973 ~ 42633124 (+) | False | LOC110506000 |
| XM_036962329.1 | mRNA | downstream | 38150 | 42491973 ~ 42633124 (+) | False | LOC110506000 |
| XM_036962330.1 | mRNA | downstream | 38150 | 42491973 ~ 42633124 (+) | False | LOC110506000 |
| XM_036962331.1 | mRNA | downstream | 38150 | 42491973 ~ 42633124 (+) | True | LOC110506000 |
| XM_036962760.1 | mRNA | downstream | 183939 | 42637762 ~ 42641606 (+) | False | LOC118944289 |
| TU2268082 | other | upstream | 156446 | 42262227 ~ 42262714 (+) | True | G1983836 |
| TU2268011 | other | upstream | 186256 | 42232240 ~ 42232904 (+) | True | G1983777 |
| TU2267940 | other | upstream | 315264 | 42063025 ~ 42103896 (+) | True | G1983721 |
| TU2267799 | other | upstream | 677561 | 41740207 ~ 41741599 (+) | False | LOC110505959 |
| TU2267800 | other | upstream | 677561 | 41740289 ~ 41741599 (+) | True | LOC110505959 |
| TU2268800 | other | downstream | 269152 | 42722975 ~ 42727949 (+) | False | LOC110505989 |
| TU2268994 | other | downstream | 513593 | 42967416 ~ 42975274 (+) | False | G1984581 |
| TU2268996 | other | downstream | 513593 | 42967416 ~ 42975274 (+) | True | G1984581 |
| TU2268828 | other | downstream | 588858 | 43042681 ~ 43043318 (+) | True | G1984431 |
| TU2269253 | other | downstream | 1017733 | 43471556 ~ 43472009 (+) | True | G1984764 |
