Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2240073 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1959108 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 18920803 ~ 18921002 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
18,918,400
18,918,800
18,919,200
18,919,600
18,920,000
18,920,400
18,920,400
18,920,800
18,921,200
18,921,600
18,922,000
18,922,400
NC_048589.1
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| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2240071 | lncRNA | downstream | 15981 | 18904583 ~ 18904822 (-) | True | G1959106 |
| TU2239971 | lncRNA | downstream | 165339 | 18755175 ~ 18755464 (-) | True | G1959008 |
| TU2239967 | lncRNA | downstream | 168762 | 18751829 ~ 18752041 (-) | True | G1959004 |
| TU2239932 | lncRNA | downstream | 188987 | 18716253 ~ 18731816 (-) | True | G1958969 |
| TU2239874 | lncRNA | downstream | 201784 | 18660299 ~ 18719019 (-) | True | G1958924 |
| TU2240076 | lncRNA | upstream | 13178 | 18934180 ~ 18934400 (-) | True | G1959111 |
| TU2240080 | lncRNA | upstream | 18867 | 18939869 ~ 18940155 (-) | True | G1959115 |
| TU2240110 | lncRNA | upstream | 58691 | 18979693 ~ 18979900 (-) | True | G1959145 |
| TU2240111 | lncRNA | upstream | 59060 | 18980062 ~ 18980346 (-) | True | G1959146 |
| TU2240154 | lncRNA | upstream | 118700 | 19039702 ~ 19045321 (-) | True | G1959182 |
| XM_021584766.2 | mRNA | downstream | 79005 | 18771360 ~ 18841798 (-) | True | LOC110505507 |
| XM_021584765.2 | mRNA | downstream | 145585 | 18771360 ~ 18775218 (-) | False | LOC110505507 |
| LOC110505506 | mRNA | downstream | 153196 | 18763775 ~ 18767607 (-) | False | LOC110505506 |
| XM_036962244.1 | mRNA | downstream | 407253 | 18391169 ~ 18513550 (-) | True | LOC110505502 |
| XM_036962243.1 | mRNA | downstream | 433771 | 18391169 ~ 18487032 (-) | False | LOC110505502 |
| XM_021584768.2 | mRNA | upstream | 6895 | 18927897 ~ 18977912 (-) | False | fsip1 |
| XM_021584769.2 | mRNA | upstream | 6895 | 18927897 ~ 18977912 (-) | True | fsip1 |
| XM_021584770.2 | mRNA | upstream | 69877 | 18990879 ~ 19011636 (-) | True | LOC110505510 |
| XM_036962955.1 | mRNA | upstream | 157850 | 19078852 ~ 19086241 (-) | False | LOC110505513 |
| XM_036962956.1 | mRNA | upstream | 157850 | 19078852 ~ 19086241 (-) | False | LOC110505513 |
| TU2239973 | other | downstream | 153281 | 18763824 ~ 18767522 (-) | True | LOC110505506 |
| TU2238493 | other | downstream | 1210162 | 17698424 ~ 17710641 (-) | True | LOC110505483 |
| TU2238423 | other | downstream | 1307932 | 17610554 ~ 17612871 (-) | False | LOC110505478 |
| TU2238425 | other | downstream | 1307932 | 17610554 ~ 17612871 (-) | True | LOC110505478 |
| TU2238429 | other | downstream | 1308948 | 17609187 ~ 17611855 (-) | False | LOC110505478 |
| TU2240183 | other | upstream | 162351 | 19083353 ~ 19083763 (-) | False | LOC110505513 |
| TU2240696 | other | upstream | 464735 | 19385737 ~ 19395564 (-) | True | G1959632 |
| TU2240720 | other | upstream | 493840 | 19414842 ~ 19417849 (-) | True | LOC110505524 |
| TU2240753 | other | upstream | 538416 | 19459418 ~ 19463061 (-) | False | exd1 |
| TU2240836 | other | upstream | 623428 | 19544430 ~ 19544883 (-) | True | G1959757 |
