RNA id: TU2247045



Basic Information


Item Value
RNA id TU2247045
length 395
RNA type TUCP
GC content 0.55
exon number 1
gene id G1965263
representative True

Chromosome Information


Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 24361088 ~ 24361482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gccccaataggtccacagacgatgcaatcacactgcacactgccctaacccatctggacaagaggaatacctatgttagaatgctgttcatcgactacagctcagcatttaacaccatagtaccctccaaactcgtcattaaggtcgacaccctgggtctcgaccccgccctgtgcaactgggtcctggacttcctgacgggccgcccccaggtggtgagggtaggaaacaacatctccaccccgctgatcctcaacactggggccccacaagggtgcgttctcagccctctcctgtactcctgttcacccatgactgcgtggccatgcacgcctccaactcaatcaagtttgtagacaacactacagtggtaggcttgattaccaacaacgacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2247037 lncRNA upstream 21582 24339142 ~ 24339506 (+) True G1965255
TU2247012 lncRNA upstream 61382 24297964 ~ 24299706 (+) True G1965239
TU2247009 lncRNA upstream 77579 24282948 ~ 24283509 (+) True G1965236
TU2246980 lncRNA upstream 113739 24245634 ~ 24247349 (+) True G1965207
TU2246940 lncRNA upstream 147951 24212929 ~ 24213137 (+) True G1965173
TU2247046 lncRNA downstream 211 24361693 ~ 24362029 (+) True G1965264
TU2247047 lncRNA downstream 1608 24363090 ~ 24363296 (+) True G1965265
TU2247048 lncRNA downstream 1848 24363330 ~ 24363556 (+) True G1965266
TU2247053 lncRNA downstream 18469 24379951 ~ 24380158 (+) True G1965271
TU2247055 lncRNA downstream 19681 24381163 ~ 24381470 (+) True G1965273
XM_021585064.2 mRNA upstream 5785 24316812 ~ 24355303 (+) False LOC110505678
XM_021585066.2 mRNA downstream 14345 24375827 ~ 24378263 (+) False zgc:123321
XM_036963017.1 mRNA downstream 14988 24376470 ~ 24378263 (+) True zgc:123321
XM_021585067.2 mRNA downstream 23657 24385139 ~ 24391050 (+) True utp25
XM_021585070.2 mRNA downstream 86131 24447613 ~ 24449656 (+) True LOC110505684
XM_021585080.2 mRNA downstream 142790 24504272 ~ 24507841 (+) True slc66a3
TU2247044 other upstream 103 24360437 ~ 24360985 (+) True G1965262
TU2246198 other upstream 284367 24076521 ~ 24076721 (+) True G1964499
TU2245829 other upstream 747323 23605934 ~ 23613765 (+) True G1964177
TU2245342 other upstream 1442402 22917946 ~ 22918686 (+) True G1963734
TU2244488 other upstream 1968132 22392591 ~ 22392956 (+) True G1962949
TU2247195 other downstream 204249 24565731 ~ 24567147 (+) True G1965396
TU2247601 other downstream 427645 24789127 ~ 24791594 (+) True LOC110505697
TU2248937 other downstream 1470094 25831576 ~ 25833321 (+) True G1967032
TU2249960 other downstream 2293423 26654905 ~ 26655336 (+) True G1967965
TU2250364 other downstream 2627357 26988839 ~ 27056667 (+) False LOC110505721

Expression Profile