Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2251079 |
| length | 331 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G1968975 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 27482774 ~ 27483104 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2251061 | lncRNA | upstream | 12094 | 27470375 ~ 27470680 (+) | True | G1968957 |
| TU2251027 | lncRNA | upstream | 35536 | 27447010 ~ 27447238 (+) | True | G1968923 |
| TU2251025 | lncRNA | upstream | 36989 | 27445430 ~ 27445785 (+) | True | G1968921 |
| TU2250599 | lncRNA | upstream | 123868 | 27358657 ~ 27358906 (+) | True | G1968536 |
| TU2250484 | lncRNA | upstream | 280077 | 27198818 ~ 27202697 (+) | True | G1968429 |
| TU2251089 | lncRNA | downstream | 8946 | 27492050 ~ 27492274 (+) | True | G1968985 |
| TU2251093 | lncRNA | downstream | 11994 | 27495098 ~ 27495327 (+) | True | G1968989 |
| TU2251113 | lncRNA | downstream | 26166 | 27509270 ~ 27509499 (+) | True | G1969009 |
| TU2251149 | lncRNA | downstream | 64888 | 27547992 ~ 27555033 (+) | False | G1969044 |
| TU2251151 | lncRNA | downstream | 64888 | 27547992 ~ 27555033 (+) | True | G1969044 |
| XM_036962397.1 | mRNA | upstream | 381224 | 27099673 ~ 27101550 (+) | True | LOC110505722 |
| XM_036962396.1 | mRNA | upstream | 383064 | 26988390 ~ 27099710 (+) | False | LOC110505721 |
| XM_021585116.2 | mRNA | upstream | 393426 | 26988390 ~ 27089348 (+) | False | LOC110505721 |
| XM_021585126.2 | mRNA | downstream | 181893 | 27664997 ~ 27670414 (+) | True | LOC110505726 |
| XM_021585131.2 | mRNA | downstream | 211744 | 27694848 ~ 27708762 (+) | True | calm1a |
| XR_005039596.1 | mRNA | downstream | 231996 | 27715100 ~ 27721101 (+) | False | LOC118944371 |
| XM_036962494.1 | mRNA | downstream | 376912 | 27860016 ~ 27978224 (+) | False | LOC110505733 |
| XM_036962492.1 | mRNA | downstream | 376912 | 27860016 ~ 27979349 (+) | False | LOC110505733 |
| TU2250361 | other | upstream | 394458 | 27081262 ~ 27088316 (+) | True | LOC110505721 |
| TU2250362 | other | upstream | 405634 | 27072415 ~ 27077140 (+) | False | LOC110505721 |
| TU2250364 | other | upstream | 426107 | 26988839 ~ 27056667 (+) | False | LOC110505721 |
| TU2249960 | other | upstream | 827438 | 26654905 ~ 26655336 (+) | True | G1967965 |
| TU2248937 | other | upstream | 1649453 | 25831576 ~ 25833321 (+) | True | G1967032 |
| TU2252207 | other | downstream | 930496 | 28413600 ~ 28413919 (+) | True | G1970001 |
| TU2253384 | other | downstream | 1991016 | 29474120 ~ 29478383 (+) | True | G1971104 |
| TU2254300 | other | downstream | 2840409 | 30323513 ~ 30330437 (+) | True | LOC110505775 |
| TU2254659 | other | downstream | 3147224 | 30630328 ~ 30632667 (+) | True | G1972242 |
| TU2254661 | other | downstream | 3153950 | 30637054 ~ 30655039 (+) | True | G1972244 |
