Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2251556 |
| length | 387 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1969408 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28161309 ~ 28161695 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2251545 | lncRNA | upstream | 17733 | 28143198 ~ 28143576 (+) | True | G1969397 |
| TU2251534 | lncRNA | upstream | 30607 | 28130482 ~ 28130702 (+) | True | G1969387 |
| TU2251531 | lncRNA | upstream | 44535 | 28116571 ~ 28116774 (+) | True | G1969384 |
| TU2251404 | lncRNA | upstream | 94660 | 28065726 ~ 28066649 (+) | True | G1969263 |
| TU2251399 | lncRNA | upstream | 95642 | 28061876 ~ 28065667 (+) | True | LOC110505741 |
| TU2251566 | lncRNA | downstream | 14162 | 28175857 ~ 28176402 (+) | True | G1969418 |
| TU2251568 | lncRNA | downstream | 15906 | 28177601 ~ 28177905 (+) | True | G1969420 |
| TU2251576 | lncRNA | downstream | 28850 | 28190545 ~ 28190864 (+) | True | G1969428 |
| TU2252014 | lncRNA | downstream | 120996 | 28282691 ~ 28283744 (+) | True | G1969814 |
| TU2252020 | lncRNA | downstream | 131296 | 28292991 ~ 28293287 (+) | True | G1969820 |
| XM_021585154.2 | mRNA | upstream | 54933 | 28099654 ~ 28106376 (+) | True | pnn |
| XM_021582987.2 | mRNA | upstream | 62050 | 28094505 ~ 28099259 (+) | False | gemin2 |
| NM_001160644.2 | mRNA | upstream | 62054 | 28094555 ~ 28099255 (+) | True | gemin2 |
| XM_021585155.2 | mRNA | upstream | 95643 | 28058192 ~ 28065666 (+) | False | LOC110505741 |
| XM_021585141.2 | mRNA | upstream | 110183 | 28041601 ~ 28051126 (+) | True | ppp2r3c |
| XM_021585156.2 | mRNA | downstream | 386853 | 28548548 ~ 28601863 (+) | False | LOC110505743 |
| XM_021583111.2 | mRNA | downstream | 939367 | 29101062 ~ 29106042 (+) | True | LOC110504335 |
| XM_036962819.1 | mRNA | downstream | 944512 | 29106207 ~ 29113664 (+) | False | ccdc175 |
| XM_021585157.2 | mRNA | downstream | 944516 | 29106211 ~ 29113664 (+) | False | ccdc175 |
| XM_021585160.2 | mRNA | downstream | 967348 | 29129043 ~ 29132925 (+) | False | LOC110505748 |
| TU2250361 | other | upstream | 1072993 | 27081262 ~ 27088316 (+) | True | LOC110505721 |
| TU2250362 | other | upstream | 1084169 | 27072415 ~ 27077140 (+) | False | LOC110505721 |
| TU2250364 | other | upstream | 1104642 | 26988839 ~ 27056667 (+) | False | LOC110505721 |
| TU2249960 | other | upstream | 1505973 | 26654905 ~ 26655336 (+) | True | G1967965 |
| TU2248937 | other | upstream | 2327988 | 25831576 ~ 25833321 (+) | True | G1967032 |
| TU2252207 | other | downstream | 251905 | 28413600 ~ 28413919 (+) | True | G1970001 |
| TU2253384 | other | downstream | 1312425 | 29474120 ~ 29478383 (+) | True | G1971104 |
| TU2254300 | other | downstream | 2161818 | 30323513 ~ 30330437 (+) | True | LOC110505775 |
| TU2254659 | other | downstream | 2468633 | 30630328 ~ 30632667 (+) | True | G1972242 |
| TU2254661 | other | downstream | 2475359 | 30637054 ~ 30655039 (+) | True | G1972244 |
