Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2252389 |
| length | 273 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1970180 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28547431 ~ 28547703 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2252388 | lncRNA | upstream | 157 | 28546926 ~ 28547274 (+) | True | G1970179 |
| TU2252387 | lncRNA | upstream | 783 | 28546309 ~ 28546648 (+) | True | G1970178 |
| TU2252385 | lncRNA | upstream | 3997 | 28543076 ~ 28543434 (+) | True | G1970176 |
| TU2252380 | lncRNA | upstream | 5929 | 28540518 ~ 28541502 (+) | True | G1970171 |
| TU2252364 | lncRNA | upstream | 20970 | 28526159 ~ 28526461 (+) | True | G1970155 |
| TU2252390 | lncRNA | downstream | 71 | 28547774 ~ 28548258 (+) | True | G1970181 |
| TU2252418 | lncRNA | downstream | 32872 | 28580575 ~ 28581455 (+) | True | G1970209 |
| TU2252391 | lncRNA | downstream | 53492 | 28601195 ~ 28601830 (+) | True | LOC110505743 |
| TU2252688 | lncRNA | downstream | 224932 | 28772635 ~ 28772950 (+) | True | G1970470 |
| TU2252821 | lncRNA | downstream | 309378 | 28857081 ~ 28861957 (+) | True | G1970601 |
| XM_021585154.2 | mRNA | upstream | 441055 | 28099654 ~ 28106376 (+) | True | pnn |
| XM_021582987.2 | mRNA | upstream | 448172 | 28094505 ~ 28099259 (+) | False | gemin2 |
| NM_001160644.2 | mRNA | upstream | 448176 | 28094555 ~ 28099255 (+) | True | gemin2 |
| XM_021585155.2 | mRNA | upstream | 481765 | 28058192 ~ 28065666 (+) | False | LOC110505741 |
| XM_021585141.2 | mRNA | upstream | 496305 | 28041601 ~ 28051126 (+) | True | ppp2r3c |
| XM_021585156.2 | mRNA | downstream | 845 | 28548548 ~ 28601863 (+) | False | LOC110505743 |
| XM_021583111.2 | mRNA | downstream | 553359 | 29101062 ~ 29106042 (+) | True | LOC110504335 |
| XM_036962819.1 | mRNA | downstream | 558504 | 29106207 ~ 29113664 (+) | False | ccdc175 |
| XM_021585157.2 | mRNA | downstream | 558508 | 29106211 ~ 29113664 (+) | False | ccdc175 |
| XM_021585160.2 | mRNA | downstream | 581340 | 29129043 ~ 29132925 (+) | False | LOC110505748 |
| TU2252207 | other | upstream | 133512 | 28413600 ~ 28413919 (+) | True | G1970001 |
| TU2250361 | other | upstream | 1459115 | 27081262 ~ 27088316 (+) | True | LOC110505721 |
| TU2250362 | other | upstream | 1470291 | 27072415 ~ 27077140 (+) | False | LOC110505721 |
| TU2250364 | other | upstream | 1490764 | 26988839 ~ 27056667 (+) | False | LOC110505721 |
| TU2249960 | other | upstream | 1892095 | 26654905 ~ 26655336 (+) | True | G1967965 |
| TU2253384 | other | downstream | 926417 | 29474120 ~ 29478383 (+) | True | G1971104 |
| TU2254300 | other | downstream | 1775810 | 30323513 ~ 30330437 (+) | True | LOC110505775 |
| TU2254659 | other | downstream | 2082625 | 30630328 ~ 30632667 (+) | True | G1972242 |
| TU2254661 | other | downstream | 2089351 | 30637054 ~ 30655039 (+) | True | G1972244 |
| TU2254663 | other | downstream | 2111701 | 30659404 ~ 30679995 (+) | True | G1972245 |
