Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2253300 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1971035 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29212710 ~ 29212925 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2253175 | lncRNA | upstream | 35999 | 29176404 ~ 29176711 (+) | True | G1970921 |
| TU2253147 | lncRNA | upstream | 67914 | 29143867 ~ 29144796 (+) | False | G1970898 |
| TU2253148 | lncRNA | upstream | 67914 | 29143867 ~ 29144796 (+) | True | G1970898 |
| TU2253139 | lncRNA | upstream | 75877 | 29131733 ~ 29136833 (+) | True | LOC110505748 |
| TU2253117 | lncRNA | upstream | 97745 | 29113625 ~ 29114965 (+) | True | ccdc175 |
| TU2253308 | lncRNA | downstream | 3890 | 29216815 ~ 29217121 (+) | True | G1971043 |
| TU2253306 | lncRNA | downstream | 8188 | 29221113 ~ 29221767 (+) | True | G1971041 |
| TU2253331 | lncRNA | downstream | 63183 | 29276108 ~ 29276731 (+) | True | G1971066 |
| TU2253336 | lncRNA | downstream | 68959 | 29281884 ~ 29282087 (+) | True | G1971071 |
| TU2253338 | lncRNA | downstream | 70957 | 29283882 ~ 29289836 (+) | True | G1971073 |
| XM_021585160.2 | mRNA | upstream | 79785 | 29129043 ~ 29132925 (+) | False | LOC110505748 |
| XM_036962819.1 | mRNA | upstream | 99046 | 29106207 ~ 29113664 (+) | False | ccdc175 |
| XM_021585157.2 | mRNA | upstream | 99046 | 29106211 ~ 29113664 (+) | False | ccdc175 |
| XM_021583111.2 | mRNA | upstream | 106668 | 29101062 ~ 29106042 (+) | True | LOC110504335 |
| XM_021585156.2 | mRNA | upstream | 610847 | 28548548 ~ 28601863 (+) | False | LOC110505743 |
| XM_021585171.2 | mRNA | downstream | 59077 | 29272002 ~ 29274608 (+) | True | gjb9a |
| XM_021585176.2 | mRNA | downstream | 108409 | 29321334 ~ 29326173 (+) | True | adprs |
| XM_021585184.2 | mRNA | downstream | 113349 | 29326274 ~ 29334901 (+) | False | LOC110505757 |
| XM_021585182.2 | mRNA | downstream | 113351 | 29326276 ~ 29334898 (+) | False | LOC110505757 |
| XM_021585183.2 | mRNA | downstream | 113373 | 29326298 ~ 29334901 (+) | False | LOC110505757 |
| TU2252207 | other | upstream | 798791 | 28413600 ~ 28413919 (+) | True | G1970001 |
| TU2250361 | other | upstream | 2124394 | 27081262 ~ 27088316 (+) | True | LOC110505721 |
| TU2250362 | other | upstream | 2135570 | 27072415 ~ 27077140 (+) | False | LOC110505721 |
| TU2250364 | other | upstream | 2156043 | 26988839 ~ 27056667 (+) | False | LOC110505721 |
| TU2249960 | other | upstream | 2557374 | 26654905 ~ 26655336 (+) | True | G1967965 |
| TU2253384 | other | downstream | 261195 | 29474120 ~ 29478383 (+) | True | G1971104 |
| TU2254300 | other | downstream | 1110588 | 30323513 ~ 30330437 (+) | True | LOC110505775 |
| TU2254659 | other | downstream | 1417403 | 30630328 ~ 30632667 (+) | True | G1972242 |
| TU2254661 | other | downstream | 1424129 | 30637054 ~ 30655039 (+) | True | G1972244 |
| TU2254663 | other | downstream | 1446479 | 30659404 ~ 30679995 (+) | True | G1972245 |
