RNA id: TU2255302



Basic Information


Item Value
RNA id TU2255302
length 448
RNA type TUCP
GC content 0.60
exon number 2
gene id G1972810
representative False

Chromosome Information


Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30616588 ~ 30683403 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gttggtgacatgggggagacagagggagacaggtggtgacatgggggagacagtagggagacaggtggtgacatggggtagacagagggagatagatagtgacatgggggagacagagggagacaggtggtgacatgggggagacagagggagacaggtggcgacatgggggagacagagggagacaggtggtgacatgggggagacagagggagacaggtggtgacatgggggagacagtagggagacaggtggtgacatgggggagacagagggagatagatagtgacatgggggagacagagggagacaggtggcgacatgggggagaaggagggagacaggtggcgacatgggggagaaggaggaagacaggtggcgacatggtggagacagagggagacaggtggtgacatgggggagacaggtggtgacatgggggagaagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2255295 lncRNA downstream 12867 30613023 ~ 30613222 (-) True G1972807
TU2255287 lncRNA downstream 29524 30596326 ~ 30596565 (-) True G1972799
TU2255286 lncRNA downstream 38588 30587032 ~ 30587501 (-) True G1972798
TU2255285 lncRNA downstream 42134 30583743 ~ 30583955 (-) True G1972797
TU2255282 lncRNA downstream 44753 30581107 ~ 30581336 (-) True G1972794
TU2255337 lncRNA upstream 3459 30686862 ~ 30687083 (-) True G1972813
TU2255338 lncRNA upstream 7412 30690815 ~ 30691131 (-) True G1972814
TU2255341 lncRNA upstream 13186 30696589 ~ 30696915 (-) True G1972817
TU2255343 lncRNA upstream 18803 30702206 ~ 30703547 (-) True G1972818
TU2255349 lncRNA upstream 36071 30719474 ~ 30719679 (-) True G1972824
LOC110504221 mRNA downstream 629410 29993757 ~ 29996679 (-) True LOC110504221
XM_021585204.2 mRNA downstream 646564 29942119 ~ 29979525 (-) True LOC110505770
XM_021585199.2 mRNA downstream 646565 29942119 ~ 29979524 (-) False LOC110505770
XM_021585201.2 mRNA downstream 646566 29942119 ~ 29979523 (-) False LOC110505770
XM_021585211.2 mRNA upstream 173647 30857050 ~ 30870523 (-) False LOC110505778
XM_021585210.2 mRNA upstream 173647 30857050 ~ 30872023 (-) True LOC110505778
NM_001165152.2 mRNA upstream 191991 30875394 ~ 30880153 (-) False sptssa
XM_021585214.2 mRNA upstream 197231 30880634 ~ 30891844 (-) False LOC110505780
XM_021585216.2 mRNA upstream 197231 30880634 ~ 30891854 (-) False LOC110505780
TU2255230 other downstream 118031 30507551 ~ 30508058 (-) True G1972746
TU2254903 other downstream 643189 29982284 ~ 29982900 (-) True G1972454
TU2253707 other downstream 1101043 29522760 ~ 29525046 (-) True G1971357
TU2252826 other downstream 1764102 28857940 ~ 28861987 (-) True G1970606
TU2251917 other downstream 2482327 28143438 ~ 28143762 (-) True G1969724
TU2255376 other upstream 81553 30764956 ~ 30765933 (-) True G1972851
TU2256456 other upstream 901137 31584540 ~ 31585046 (-) True G1973793
TU2256505 other upstream 931018 31614421 ~ 31618499 (-) True G1973835
TU2256690 other upstream 1303040 31986443 ~ 31986884 (-) True G1974000
TU2258248 other upstream 2636326 33319729 ~ 33324325 (-) True G1975453

Expression Profile