RNA id: TU2256456



Basic Information


Item Value
RNA id TU2256456
length 438
RNA type TUCP
GC content 0.63
exon number 3
gene id G1973793
representative True

Chromosome Information


Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31584540 ~ 31585046 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGTTGGCTAATCTGTCCTGGCCATGTCGGCTGACTGGGCTGTCCCCCACCTGGTTGTCCGGGCCATGAGGGTTGGGAAGGGTTTGGTTGTTGTCCAGGCCACATGGGGGCGGGCTGGCCTGGTTGCTGCTGTCCAGGCCAAGCCGGTTGACCACCAGGCTGGCCTGGTTGCTGCTGTCCAGGCCAAGCCGGTTGACCACCAGGCTGTCCTGGCCATGTTGGCTGGTTGGGTTGCCCACCAGGCCACACGCCCCCACTACTCTGCTGGTTGTTCTGGCTTGGCCAGCCCGGTTCACCACCCAGAGCATCTGAAAGCTGTAGGGAgagaggggaagcAGAGCGGGGTGAGAGAGGAGAAGCAGagcagggtgagagaggggaagcagagcagggtgagagaggggaTAGGTAGTGTGCACAAGTGGATGTGTCTCCTTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2256424 lncRNA downstream 11484 31503135 ~ 31573056 (-) False G1973772
TU2256426 lncRNA downstream 11484 31503135 ~ 31573056 (-) False G1973772
TU2256427 lncRNA downstream 11484 31503135 ~ 31573056 (-) False G1973772
TU2256428 lncRNA downstream 11484 31503135 ~ 31573056 (-) False G1973772
TU2256429 lncRNA downstream 11484 31503135 ~ 31573056 (-) False G1973772
TU2256484 lncRNA upstream 4927 31589973 ~ 31590214 (-) True G1973819
TU2256488 lncRNA upstream 12411 31597457 ~ 31597779 (-) True G1973823
TU2256491 lncRNA upstream 15308 31600354 ~ 31600554 (-) True G1973826
TU2256492 lncRNA upstream 15579 31600625 ~ 31600891 (-) True G1973827
TU2256493 lncRNA upstream 16031 31601077 ~ 31601357 (-) True G1973828
LOC110505792 mRNA downstream 310574 31272049 ~ 31273966 (-) False LOC110505792
XR_002470590.2 mRNA downstream 436472 31114868 ~ 31148068 (-) True LOC110504336
XM_021585222.2 mRNA downstream 495242 31087360 ~ 31089298 (-) True LOC110505787
XM_021585219.2 mRNA downstream 592451 30986765 ~ 30992089 (-) True LOC110505783
XM_036962343.1 mRNA downstream 598776 30913042 ~ 30985764 (-) False LOC110505782
XM_021585245.2 mRNA upstream 36996 31622042 ~ 31630448 (-) False LOC110505798
XM_021585246.2 mRNA upstream 38507 31623553 ~ 31630084 (-) False LOC110505798
XM_021585247.2 mRNA upstream 38507 31623553 ~ 31632417 (-) True LOC110505798
XM_021583035.2 mRNA upstream 47713 31632759 ~ 31636055 (-) True LOC110504224
XM_021585248.2 mRNA upstream 57702 31642748 ~ 31710036 (-) False LOC110505800
TU2255376 other downstream 818607 30764956 ~ 30765933 (-) True G1972851
TU2255302 other downstream 901137 30626089 ~ 30683403 (-) False G1972810
TU2255303 other downstream 901137 30628261 ~ 30683403 (-) False G1972810
TU2255304 other downstream 909025 30616588 ~ 30675515 (-) False G1972810
TU2255230 other downstream 1076482 30507551 ~ 30508058 (-) True G1972746
TU2256505 other upstream 29375 31614421 ~ 31618499 (-) True G1973835
TU2256690 other upstream 401397 31986443 ~ 31986884 (-) True G1974000
TU2258248 other upstream 1734683 33319729 ~ 33324325 (-) True G1975453
TU2258576 other upstream 1971384 33556430 ~ 33556811 (-) True G1975763
TU2260072 other upstream 2892574 34477620 ~ 34478558 (-) False G1977046

Expression Profile