Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2259868 |
| length | 617 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G1976887 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 34566914 ~ 34670890 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2260121 | lncRNA | downstream | 3402 | 34554573 ~ 34563512 (-) | False | G1977090 |
| TU2260120 | lncRNA | downstream | 3402 | 34562919 ~ 34563512 (-) | False | G1977090 |
| TU2260123 | lncRNA | downstream | 3402 | 34562919 ~ 34563512 (-) | True | G1977090 |
| TU2260080 | lncRNA | downstream | 85808 | 34480651 ~ 34481106 (-) | True | G1977050 |
| TU2260079 | lncRNA | downstream | 86592 | 34480039 ~ 34480322 (-) | True | G1977049 |
| TU2260192 | lncRNA | upstream | 44840 | 34715730 ~ 34716718 (-) | False | rin3 |
| TU2260198 | lncRNA | upstream | 53162 | 34724052 ~ 34724291 (-) | True | rin3 |
| TU2260209 | lncRNA | upstream | 71418 | 34742308 ~ 34742527 (-) | True | G1977175 |
| TU2260199 | lncRNA | upstream | 79639 | 34750529 ~ 34752123 (-) | True | G1977166 |
| TU2260196 | lncRNA | upstream | 84598 | 34755488 ~ 34756430 (-) | True | G1977163 |
| XM_036962383.1 | mRNA | downstream | 124571 | 34292468 ~ 34442343 (-) | False | LOC110504230 |
| XM_036962384.1 | mRNA | downstream | 124571 | 34292468 ~ 34442343 (-) | False | LOC110504230 |
| XR_005039491.1 | mRNA | downstream | 331369 | 34120446 ~ 34235545 (-) | True | gphna |
| XM_036962399.1 | mRNA | downstream | 331382 | 34118176 ~ 34235532 (-) | False | gphna |
| XM_036962730.1 | mRNA | upstream | 28279 | 34699169 ~ 34700207 (-) | True | pth2 |
| XM_036962475.1 | mRNA | upstream | 44838 | 34715728 ~ 34739799 (-) | False | rin3 |
| XM_036962474.1 | mRNA | upstream | 44838 | 34715728 ~ 34739802 (-) | False | rin3 |
| XM_036962963.1 | mRNA | upstream | 103994 | 34774884 ~ 34893972 (-) | False | LOC110505825 |
| XM_036962964.1 | mRNA | upstream | 103994 | 34774884 ~ 34893972 (-) | True | LOC110505825 |
| TU2260072 | other | downstream | 88356 | 34477620 ~ 34478558 (-) | False | G1977046 |
| TU2258576 | other | downstream | 1010103 | 33556430 ~ 33556811 (-) | True | G1975763 |
| TU2258248 | other | downstream | 1242589 | 33319729 ~ 33324325 (-) | True | G1975453 |
| TU2256690 | other | downstream | 2580030 | 31986443 ~ 31986884 (-) | True | G1974000 |
| TU2256505 | other | downstream | 2948415 | 31614421 ~ 31618499 (-) | True | G1973835 |
| TU2260263 | other | upstream | 204495 | 34875385 ~ 34876181 (-) | True | G1977226 |
| TU2260403 | other | upstream | 299262 | 34970152 ~ 34971557 (-) | False | LOC110505829 |
| TU2260406 | other | upstream | 303903 | 34974793 ~ 34979507 (-) | True | LOC110505829 |
| TU2260400 | other | upstream | 356210 | 35027100 ~ 35100978 (-) | False | G1977346 |
| TU2260401 | other | upstream | 356210 | 35027100 ~ 35100978 (-) | False | G1977346 |
