Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005094 |
| length | 624 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 4 |
| gene id | XLOC_002745 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 22481158 ~ 22491458 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048753 | pigment granule organization | biological_process |
| GO:0007517 | muscle organ development | biological_process |
| GO:0050931 | pigment cell differentiation | biological_process |
| GO:0043062 | extracellular structure organization | biological_process |
| GO:0030198 | extracellular matrix organization | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0032438 | melanosome organization | biological_process |
| GO:0043473 | pigmentation | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0048066 | developmental pigmentation | biological_process |
| GO:0060538 | skeletal muscle organ development | biological_process |
| GO:0033059 | cellular pigmentation | biological_process |
| GO:0030318 | melanocyte differentiation | biological_process |
| GO:0099080 | supramolecular complex | cellular_component |
| GO:0099081 | supramolecular polymer | cellular_component |
| GO:0044421 | obsolete extracellular region part | cellular_component |
| GO:0043292 | contractile fiber | cellular_component |
| GO:0048770 | pigment granule | cellular_component |
| GO:0044449 | obsolete contractile fiber part | cellular_component |
| GO:0031012 | extracellular matrix | cellular_component |
| GO:0042470 | melanosome | cellular_component |
| GO:0062023 | collagen-containing extracellular matrix | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0015629 | actin cytoskeleton | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0099512 | supramolecular fiber | cellular_component |
| GO:0031674 | I band | cellular_component |
| GO:0030016 | myofibril | cellular_component |
| GO:0030017 | sarcomere | cellular_component |
| GO:0030018 | Z disc | cellular_component |
| GO:0005201 | extracellular matrix structural constituent | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-141216-428 | Predicted to enable cytokine activity. Predicted to be involved in nucleate erythrocyte development. Predicted to act upstream of or within erythrocyte maturation. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); diabetic angiopathy; familial erythrocytosis 5; ischemia (multiple); and neurodegenerative disease (multiple). Orthologous to human EPO (erythropoietin). |
| ensembl_id | ENSDART00000180783 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005078 | lncRNA | downstream | 577030 | 21886484 ~ 21907310 (-) | False | XLOC_002733 |
| TCONS_00006038 | lncRNA | downstream | 577204 | 21895919 ~ 21907136 (-) | True | XLOC_002733 |
| TCONS_00006037 | lncRNA | downstream | 640477 | 21646154 ~ 21843863 (-) | False | XLOC_002732 |
| TCONS_00005075 | lncRNA | downstream | 640613 | 21814475 ~ 21843727 (-) | True | XLOC_002732 |
| TCONS_00006036 | lncRNA | downstream | 662386 | 21646154 ~ 21821954 (-) | False | XLOC_002732 |
| TCONS_00006039 | lncRNA | upstream | 39432 | 22530785 ~ 22534924 (-) | True | XLOC_002748 |
| TCONS_00006040 | lncRNA | upstream | 62996 | 22554349 ~ 22567208 (-) | True | XLOC_002749 |
| TCONS_00006041 | lncRNA | upstream | 112920 | 22604273 ~ 22607715 (-) | True | XLOC_002750 |
| TCONS_00006042 | lncRNA | upstream | 416044 | 22907397 ~ 22911674 (-) | True | XLOC_002756 |
| TCONS_00006043 | lncRNA | upstream | 1021769 | 23513122 ~ 23519215 (-) | True | XLOC_002761 |
| TCONS_00005091 | mRNA | downstream | 234896 | 22161585 ~ 22249444 (-) | True | XLOC_002743 |
| TCONS_00005090 | mRNA | downstream | 333921 | 22144768 ~ 22150419 (-) | True | XLOC_002742 |
| TCONS_00005089 | mRNA | downstream | 356398 | 22123831 ~ 22127942 (-) | True | XLOC_002741 |
| TCONS_00005088 | mRNA | downstream | 367219 | 22110842 ~ 22117121 (-) | True | XLOC_002740 |
| TCONS_00005087 | mRNA | downstream | 378009 | 22097328 ~ 22106331 (-) | True | XLOC_002739 |
| TCONS_00005095 | mRNA | upstream | 3473 | 22494826 ~ 22497980 (-) | True | XLOC_002746 |
| TCONS_00005096 | mRNA | upstream | 10410 | 22501763 ~ 22506044 (-) | True | XLOC_002747 |
| TCONS_00005098 | mRNA | upstream | 297966 | 22789319 ~ 22803854 (-) | False | XLOC_002752 |
| TCONS_00005099 | mRNA | upstream | 297980 | 22789333 ~ 22803740 (-) | False | XLOC_002752 |
| TCONS_00005100 | mRNA | upstream | 298391 | 22789744 ~ 22797959 (-) | True | XLOC_002752 |
| TCONS_00005092 | other | downstream | 212437 | 22271789 ~ 22271903 (-) | True | XLOC_002744 |
| TCONS_00005077 | other | downstream | 577235 | 21863066 ~ 21907105 (-) | False | XLOC_002733 |
| TCONS_00005073 | other | downstream | 910934 | 21570361 ~ 21573406 (-) | False | XLOC_002730 |
| TCONS_00005070 | other | downstream | 939823 | 21543901 ~ 21544517 (-) | True | XLOC_002729 |
| TCONS_00005063 | other | downstream | 1440932 | 21040657 ~ 21043408 (-) | True | XLOC_002726 |
| TCONS_00005097 | other | upstream | 260879 | 22752232 ~ 22752348 (-) | True | XLOC_002751 |
| TCONS_00005104 | other | upstream | 337013 | 22828366 ~ 22831429 (-) | True | XLOC_002753 |
| TCONS_00005129 | other | upstream | 1886064 | 24377417 ~ 24379776 (-) | True | XLOC_002767 |
| TCONS_00005130 | other | upstream | 1891913 | 24383266 ~ 24383381 (-) | True | XLOC_002768 |
| TCONS_00005133 | other | upstream | 1964263 | 24455616 ~ 24455732 (-) | True | XLOC_002771 |
