Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2269083 |
| length | 538 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G1984650 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 43297643 ~ 43305878 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2269094 | lncRNA | upstream | 3257 | 43259810 ~ 43294386 (+) | False | G1984654 |
| TU2269092 | lncRNA | upstream | 3257 | 43282685 ~ 43294386 (+) | True | G1984654 |
| TU2269089 | lncRNA | upstream | 23225 | 43247347 ~ 43274418 (+) | True | G1984651 |
| TU2269080 | lncRNA | upstream | 51617 | 43245818 ~ 43246026 (+) | True | G1984649 |
| TU2269058 | lncRNA | upstream | 109199 | 43186204 ~ 43188444 (+) | True | G1984627 |
| TU2269110 | lncRNA | downstream | 6754 | 43312632 ~ 43313011 (+) | True | G1984666 |
| TU2269149 | lncRNA | downstream | 28395 | 43334273 ~ 43344869 (+) | True | G1984682 |
| TU2269197 | lncRNA | downstream | 80758 | 43386636 ~ 43388530 (+) | True | G1984719 |
| TU2269204 | lncRNA | downstream | 96207 | 43402085 ~ 43408977 (+) | True | G1984724 |
| TU2269213 | lncRNA | downstream | 116109 | 43421987 ~ 43429153 (+) | True | G1984733 |
| XM_036962599.1 | mRNA | upstream | 145078 | 43110612 ~ 43152565 (+) | False | LOC110506001 |
| XM_036962600.1 | mRNA | upstream | 145078 | 43110612 ~ 43152565 (+) | True | LOC110506001 |
| XM_036962598.1 | mRNA | upstream | 223714 | 43060008 ~ 43073929 (+) | True | vti1b |
| XM_036962337.1 | mRNA | upstream | 258456 | 42918937 ~ 43039187 (+) | False | zfyve26 |
| XM_036962272.1 | mRNA | downstream | 70216 | 43376094 ~ 43395316 (+) | True | LOC110505947 |
| XM_021585425.2 | mRNA | downstream | 105077 | 43410955 ~ 43436311 (+) | False | plekhd1 |
| XM_021585426.2 | mRNA | downstream | 115839 | 43421717 ~ 43436311 (+) | True | plekhd1 |
| XM_036962745.1 | mRNA | downstream | 163817 | 43469695 ~ 43470614 (+) | True | LOC118944278 |
| XR_005039591.1 | mRNA | downstream | 410236 | 43716114 ~ 43716793 (+) | True | LOC118944350 |
| TU2268828 | other | upstream | 254325 | 43042681 ~ 43043318 (+) | True | G1984431 |
| TU2268994 | other | upstream | 322369 | 42967416 ~ 42975274 (+) | False | G1984581 |
| TU2268996 | other | upstream | 322369 | 42967416 ~ 42975274 (+) | True | G1984581 |
| TU2268800 | other | upstream | 569694 | 42722975 ~ 42727949 (+) | False | LOC110505989 |
| TU2268690 | other | upstream | 843820 | 42419160 ~ 42453823 (+) | True | cn112 |
| TU2269253 | other | downstream | 165678 | 43471556 ~ 43472009 (+) | True | G1984764 |
| TU2269294 | other | downstream | 268165 | 43574043 ~ 43574613 (+) | True | G1984797 |
| TU2269300 | other | downstream | 307670 | 43613548 ~ 43635501 (+) | False | G1984803 |
| TU2269305 | other | downstream | 322114 | 43627992 ~ 43628808 (+) | True | G1984807 |
| TU2269309 | other | downstream | 327954 | 43633832 ~ 43634426 (+) | True | G1984810 |
