Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021608052.2 |
| length | 2988 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC110526863 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 9540286 ~ 9543273 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K09395 | FOXB; forkhead box protein B |
9,537,000
9,538,000
9,539,000
9,540,000
9,541,000
9,542,000
9,543,000
9,544,000
9,545,000
9,546,000
NC_048590.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2283195 | lncRNA | upstream | 14917 | 9524967 ~ 9525369 (+) | True | G1994827 |
| TU2283179 | lncRNA | upstream | 31712 | 9505775 ~ 9508574 (+) | False | G1994815 |
| TU2283178 | lncRNA | upstream | 31712 | 9508284 ~ 9508574 (+) | True | G1994815 |
| TU2283180 | lncRNA | upstream | 33838 | 9505835 ~ 9506448 (+) | True | G1994816 |
| TU2283172 | lncRNA | upstream | 40268 | 9499793 ~ 9500018 (+) | True | G1994810 |
| TU2283216 | lncRNA | downstream | 14837 | 9558110 ~ 9559723 (+) | True | G1994848 |
| TU2283222 | lncRNA | downstream | 17450 | 9560723 ~ 9562415 (+) | False | G1994851 |
| TU2283282 | lncRNA | downstream | 55362 | 9598635 ~ 9600205 (+) | False | G1994894 |
| TU2283283 | lncRNA | downstream | 55362 | 9598635 ~ 9602550 (+) | True | G1994894 |
| TU2283285 | lncRNA | downstream | 59528 | 9602801 ~ 9603033 (+) | True | G1994896 |
| XM_036963550.1 | mRNA | upstream | 306283 | 9173028 ~ 9234003 (+) | True | klf13 |
| XM_036963210.1 | mRNA | upstream | 524799 | 8982115 ~ 9015487 (+) | True | LOC118936595 |
| XM_036963208.1 | mRNA | upstream | 558663 | 8964942 ~ 8981623 (+) | False | LOC118944396 |
| XM_036963209.1 | mRNA | upstream | 558663 | 8964953 ~ 8981623 (+) | True | LOC118944396 |
| XM_036964330.1 | mRNA | upstream | 647126 | 8880465 ~ 8893160 (+) | True | LOC118944518 |
| XM_036964412.1 | mRNA | downstream | 164181 | 9707454 ~ 9812098 (+) | False | si:ch211-266g18.10 |
| XM_036964413.1 | mRNA | downstream | 164181 | 9707454 ~ 9812098 (+) | False | si:ch211-266g18.10 |
| XM_036964414.1 | mRNA | downstream | 164181 | 9707454 ~ 9812098 (+) | False | si:ch211-266g18.10 |
| XM_036964415.1 | mRNA | downstream | 164181 | 9707454 ~ 9812098 (+) | False | si:ch211-266g18.10 |
| XM_036964416.1 | mRNA | downstream | 164181 | 9707454 ~ 9812098 (+) | False | si:ch211-266g18.10 |
| TU2283109 | other | upstream | 149353 | 9390568 ~ 9390933 (+) | True | G1994757 |
| TU2281693 | other | upstream | 842163 | 8697174 ~ 8698123 (+) | True | G1993783 |
| TU2281675 | other | upstream | 872019 | 8666601 ~ 8668267 (+) | True | G1993771 |
| TU2281607 | other | upstream | 988919 | 8537939 ~ 8551367 (+) | True | LOC110512379 |
| TU2281425 | other | upstream | 1391787 | 8143752 ~ 8148499 (+) | False | G1993593 |
| TU2283219 | other | downstream | 21770 | 9565043 ~ 9566154 (+) | True | G1994851 |
| TU2287233 | other | downstream | 3678764 | 13222037 ~ 13222681 (+) | True | G1998628 |
| TU2291409 | other | downstream | 6146495 | 15689768 ~ 15696280 (+) | True | G2002614 |
| TU2291393 | other | downstream | 6251859 | 15795132 ~ 15800073 (+) | False | LOC110506284 |
| TU2291396 | other | downstream | 6252383 | 15795656 ~ 15800073 (+) | False | LOC110506284 |
