Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2286977 |
| length | 668 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 3 |
| gene id | spdya |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 12838288 ~ 12845477 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2286947 | lncRNA | upstream | 38252 | 12797425 ~ 12800199 (+) | True | G1998350 |
| TU2286912 | lncRNA | upstream | 89453 | 12748790 ~ 12748998 (+) | True | G1998319 |
| TU2286909 | lncRNA | upstream | 95533 | 12742511 ~ 12742918 (+) | True | G1998316 |
| TU2286885 | lncRNA | upstream | 97721 | 12715306 ~ 12740730 (+) | True | G1998292 |
| TU2286883 | lncRNA | upstream | 121244 | 12715306 ~ 12717207 (+) | False | G1998292 |
| TU2287107 | lncRNA | downstream | 221786 | 13061529 ~ 13061781 (+) | True | G1998506 |
| TU2287116 | lncRNA | downstream | 233125 | 13072868 ~ 13073555 (+) | True | G1998515 |
| TU2287118 | lncRNA | downstream | 237535 | 13077278 ~ 13077507 (+) | True | G1998517 |
| TU2287134 | lncRNA | downstream | 257973 | 13097716 ~ 13098057 (+) | True | G1998533 |
| TU2287137 | lncRNA | downstream | 260450 | 13100193 ~ 13100409 (+) | True | G1998536 |
| XM_036963290.1 | mRNA | upstream | 1596737 | 11015000 ~ 11241714 (+) | False | daam2 |
| XM_036963291.1 | mRNA | upstream | 1598490 | 11014999 ~ 11239961 (+) | False | daam2 |
| XM_036963289.1 | mRNA | upstream | 1598490 | 11085873 ~ 11239961 (+) | True | daam2 |
| XM_021585680.2 | mRNA | upstream | 2556344 | 10268951 ~ 10282107 (+) | True | gnmt |
| XM_036964127.1 | mRNA | upstream | 2872490 | 9944809 ~ 9965961 (+) | True | LOC110506240 |
| XM_021585701.2 | mRNA | downstream | 23246 | 12862989 ~ 12899263 (+) | True | wdr43 |
| XM_036964534.1 | mRNA | downstream | 708188 | 13547931 ~ 13554393 (+) | False | LOC110515264 |
| XM_036964535.1 | mRNA | downstream | 708188 | 13547931 ~ 13554393 (+) | True | LOC110515264 |
| XM_021585704.2 | mRNA | downstream | 728629 | 13568372 ~ 13718686 (+) | False | LOC110506268 |
| XR_005039927.1 | mRNA | downstream | 851339 | 13691082 ~ 13691136 (+) | True | LOC118944575 |
| TU2283219 | other | upstream | 3272297 | 9565043 ~ 9566154 (+) | True | G1994851 |
| TU2283109 | other | upstream | 3447518 | 9390568 ~ 9390933 (+) | True | G1994757 |
| TU2281693 | other | upstream | 4140328 | 8697174 ~ 8698123 (+) | True | G1993783 |
| TU2281675 | other | upstream | 4170184 | 8666601 ~ 8668267 (+) | True | G1993771 |
| TU2281607 | other | upstream | 4287084 | 8537939 ~ 8551367 (+) | True | LOC110512379 |
| TU2287233 | other | downstream | 382294 | 13222037 ~ 13222681 (+) | True | G1998628 |
| TU2291409 | other | downstream | 2850025 | 15689768 ~ 15696280 (+) | True | G2002614 |
| TU2291393 | other | downstream | 2955389 | 15795132 ~ 15800073 (+) | False | LOC110506284 |
| TU2291396 | other | downstream | 2955913 | 15795656 ~ 15800073 (+) | False | LOC110506284 |
| TU2291395 | other | downstream | 2955958 | 15795701 ~ 15800073 (+) | True | LOC110506284 |
