Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021585701.2 |
| length | 2886 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 17 |
| gene id | wdr43 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 12862989 ~ 12899263 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0001525 | angiogenesis | biological_process |
| GO:0060218 | hematopoietic stem cell differentiation | biological_process |
| GO:0001570 | vasculogenesis | biological_process |
| id | description |
|---|---|
| K14546 | UTP5, WDR43; U3 small nucleolar RNA-associated protein 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2286977 | lncRNA | upstream | 23246 | 12838451 ~ 12839743 (+) | True | spdya |
| TU2286947 | lncRNA | upstream | 62790 | 12797425 ~ 12800199 (+) | True | G1998350 |
| TU2286912 | lncRNA | upstream | 113991 | 12748790 ~ 12748998 (+) | True | G1998319 |
| TU2286909 | lncRNA | upstream | 120071 | 12742511 ~ 12742918 (+) | True | G1998316 |
| TU2286885 | lncRNA | upstream | 122259 | 12715306 ~ 12740730 (+) | True | G1998292 |
| TU2287107 | lncRNA | downstream | 162266 | 13061529 ~ 13061781 (+) | True | G1998506 |
| TU2287116 | lncRNA | downstream | 173605 | 13072868 ~ 13073555 (+) | True | G1998515 |
| TU2287118 | lncRNA | downstream | 178015 | 13077278 ~ 13077507 (+) | True | G1998517 |
| TU2287134 | lncRNA | downstream | 198453 | 13097716 ~ 13098057 (+) | True | G1998533 |
| TU2287137 | lncRNA | downstream | 200930 | 13100193 ~ 13100409 (+) | True | G1998536 |
| XM_021585703.2 | mRNA | upstream | 17512 | 12838288 ~ 12845477 (+) | False | spdya |
| XM_036963290.1 | mRNA | upstream | 1621275 | 11015000 ~ 11241714 (+) | False | daam2 |
| XM_036963291.1 | mRNA | upstream | 1623028 | 11014999 ~ 11239961 (+) | False | daam2 |
| XM_036963289.1 | mRNA | upstream | 1623028 | 11085873 ~ 11239961 (+) | True | daam2 |
| XM_021585680.2 | mRNA | upstream | 2580882 | 10268951 ~ 10282107 (+) | True | gnmt |
| XM_036964534.1 | mRNA | downstream | 648668 | 13547931 ~ 13554393 (+) | False | LOC110515264 |
| XM_036964535.1 | mRNA | downstream | 648668 | 13547931 ~ 13554393 (+) | True | LOC110515264 |
| XM_021585704.2 | mRNA | downstream | 669109 | 13568372 ~ 13718686 (+) | False | LOC110506268 |
| XR_005039927.1 | mRNA | downstream | 791819 | 13691082 ~ 13691136 (+) | True | LOC118944575 |
| XM_021585705.2 | mRNA | downstream | 915286 | 13814549 ~ 13821198 (+) | True | LOC110506269 |
| TU2283219 | other | upstream | 3296835 | 9565043 ~ 9566154 (+) | True | G1994851 |
| TU2283109 | other | upstream | 3472056 | 9390568 ~ 9390933 (+) | True | G1994757 |
| TU2281693 | other | upstream | 4164866 | 8697174 ~ 8698123 (+) | True | G1993783 |
| TU2281675 | other | upstream | 4194722 | 8666601 ~ 8668267 (+) | True | G1993771 |
| TU2281607 | other | upstream | 4311622 | 8537939 ~ 8551367 (+) | True | LOC110512379 |
| TU2287233 | other | downstream | 322774 | 13222037 ~ 13222681 (+) | True | G1998628 |
| TU2291409 | other | downstream | 2790505 | 15689768 ~ 15696280 (+) | True | G2002614 |
| TU2291393 | other | downstream | 2895869 | 15795132 ~ 15800073 (+) | False | LOC110506284 |
| TU2291396 | other | downstream | 2896393 | 15795656 ~ 15800073 (+) | False | LOC110506284 |
| TU2291395 | other | downstream | 2896438 | 15795701 ~ 15800073 (+) | True | LOC110506284 |
