RNA id: TU2277524



Basic Information


Item Value
RNA id TU2277524
length 356
RNA type TUCP
GC content 0.58
exon number 1
gene id G1990907
representative True

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 3810205 ~ 3810560 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agcatggagcagccagagctgccagtcagcatggagcagccagtcagcatggagcagccagagctgccagtcatcatggagcagccagtcagcatggagcagccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactctcccagatctgccagtcgaccagactcttccagatctgccagtcgaccagactcttccagatctgccagtcgaccagaatcttccagatccgccagtcgaccagaatcttccagatccgccagtcgaccagactcttccagatccgccagtcgaccagactcttccagatccgcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2277520 lncRNA downstream 7439 3802542 ~ 3802766 (-) True G1990903
TU2277511 lncRNA downstream 15633 3792853 ~ 3794572 (-) True G1990897
TU2277509 lncRNA downstream 24991 3785003 ~ 3785214 (-) True G1990895
TU2277508 lncRNA downstream 27248 3782726 ~ 3782957 (-) True G1990894
TU2277507 lncRNA downstream 27635 3781307 ~ 3782570 (-) True G1990893
TU2277526 lncRNA upstream 6827 3817387 ~ 3818053 (-) True G1990909
TU2277528 lncRNA upstream 12493 3823053 ~ 3823329 (-) True G1990911
TU2277532 lncRNA upstream 16492 3827052 ~ 3836792 (-) True G1990913
TU2277540 lncRNA upstream 44422 3854982 ~ 3857852 (-) False G1990919
TU2277544 lncRNA upstream 46363 3856923 ~ 3857220 (-) True G1990919
XM_036964368.1 mRNA downstream 317455 3477158 ~ 3492750 (-) False LOC110506223
XR_005039677.1 mRNA downstream 624413 3184939 ~ 3185792 (-) False LOC118944414
XM_036963277.1 mRNA downstream 692962 2958963 ~ 3117243 (-) False LOC118944401
XM_036963774.1 mRNA upstream 263485 4074045 ~ 4158044 (-) False LOC110516700
XM_036963773.1 mRNA upstream 263492 4074052 ~ 4158044 (-) False LOC110516700
XM_036964019.1 mRNA upstream 559822 4370382 ~ 4390965 (-) False LOC110498670
XM_036964018.1 mRNA upstream 559822 4370382 ~ 4390993 (-) False LOC110498670
XM_036963685.1 mRNA upstream 629273 4439833 ~ 4503872 (-) False LOC118944435
TU2277346 other downstream 294545 3502951 ~ 3515660 (-) False G1990760
TU2277348 other downstream 304265 3502951 ~ 3505940 (-) True G1990760
TU2277351 other downstream 327564 3481462 ~ 3482641 (-) True LOC110506223
TU2277022 other downstream 521707 3287167 ~ 3288498 (-) True G1990495
TU2276705 other downstream 814780 2987325 ~ 2995425 (-) True LOC118944401
TU2277556 other upstream 62040 3872600 ~ 3873176 (-) True G1990926
TU2277557 other upstream 64355 3874915 ~ 3880013 (-) True G1990927
TU2277761 other upstream 309582 4120142 ~ 4158029 (-) True LOC110516700
TU2278185 other upstream 647099 4457659 ~ 4504360 (-) True LOC118944435
TU2278237 other upstream 662722 4473282 ~ 4473617 (-) True G1991381

Expression Profile