Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2279007 |
| length | 413 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G1991878 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 5387311 ~ 5387815 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2279006 | lncRNA | downstream | 6016 | 5380860 ~ 5381295 (-) | True | G1991877 |
| TU2278970 | lncRNA | downstream | 104566 | 5280160 ~ 5282745 (-) | False | G1991855 |
| TU2278971 | lncRNA | downstream | 105022 | 5280160 ~ 5282289 (-) | False | G1991855 |
| TU2278972 | lncRNA | downstream | 105022 | 5280160 ~ 5282289 (-) | True | G1991855 |
| TU2278967 | lncRNA | downstream | 115457 | 5271272 ~ 5271854 (-) | True | G1991852 |
| TU2279008 | lncRNA | upstream | 4958 | 5392773 ~ 5393119 (-) | True | G1991879 |
| TU2279025 | lncRNA | upstream | 40293 | 5428108 ~ 5428714 (-) | True | G1991894 |
| TU2279032 | lncRNA | upstream | 50544 | 5438359 ~ 5438581 (-) | True | G1991901 |
| TU2279058 | lncRNA | upstream | 54439 | 5442254 ~ 5442976 (-) | True | G1991925 |
| TU2279071 | lncRNA | upstream | 77901 | 5465716 ~ 5472953 (-) | True | G1991937 |
| XM_036963437.1 | mRNA | downstream | 85661 | 5249279 ~ 5301650 (-) | False | LOC118944412 |
| XR_005039675.1 | mRNA | downstream | 85661 | 5249279 ~ 5301650 (-) | True | LOC118944412 |
| XM_036964549.1 | mRNA | downstream | 240001 | 5143731 ~ 5147310 (-) | True | LOC110515681 |
| XM_036964493.1 | mRNA | downstream | 300871 | 5043780 ~ 5086440 (-) | False | LOC110515683 |
| XM_021605003.2 | mRNA | downstream | 412021 | 4973789 ~ 4975290 (-) | True | LOC110525056 |
| XM_036964485.1 | mRNA | upstream | 274761 | 5662576 ~ 5697258 (-) | False | usp8 |
| XM_036964484.1 | mRNA | upstream | 274761 | 5662576 ~ 5697259 (-) | True | usp8 |
| XM_036963394.1 | mRNA | upstream | 361711 | 5749526 ~ 5761005 (-) | False | LOC110514656 |
| XR_005039665.1 | mRNA | upstream | 361941 | 5749756 ~ 5761005 (-) | True | LOC110514656 |
| XM_036963392.1 | mRNA | upstream | 389207 | 5777022 ~ 5793342 (-) | True | LOC110514841 |
| TU2278960 | other | downstream | 127529 | 5257722 ~ 5259782 (-) | True | G1991846 |
| TU2278677 | other | downstream | 301625 | 5045006 ~ 5085686 (-) | True | LOC110515683 |
| TU2278541 | other | downstream | 533556 | 4849237 ~ 4853755 (-) | True | LOC110526851 |
| TU2278312 | other | downstream | 799441 | 4586727 ~ 4587870 (-) | False | G1991436 |
| TU2278238 | other | downstream | 913047 | 4473753 ~ 4474264 (-) | True | G1991382 |
| TU2279753 | other | upstream | 320453 | 5708268 ~ 5708684 (-) | True | G1992375 |
| TU2279911 | other | upstream | 598616 | 5986431 ~ 5988773 (-) | True | G1992485 |
| TU2280099 | other | upstream | 1009229 | 6397044 ~ 6410990 (-) | False | LOC118936596 |
| TU2280100 | other | upstream | 1009229 | 6397044 ~ 6402895 (-) | False | LOC118936596 |
| TU2280112 | other | upstream | 1037241 | 6425056 ~ 6429713 (-) | False | LOC118936596 |
