RNA id: TU2282482


Basic Information

Item Value
RNA id TU2282482
length 341
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G1994320
representative True

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8059158 ~ 8060038 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

acatctatcatcctaaaggaggtgtagattacatctatcatcctaaaggaggtgtagattacatctatcatcctaaaggaggtgtagattacatctatcatcctaaaggaggtgtagattacatctatcatcctaatggaggtgtagattacatctatcatcctaatggaggtgtagattacatctatcatcctaaaggaggtgtagattacatctatcatcctaaaggaggtgtagattacatctatcatcctaatggaggtgtagattacatctatcatcctaaaggaggtgtagattacatctatcatcctaatggaggtgtagattacatctatcat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2282445 lncRNA downstream 21069 8026205 ~ 8038089 (-) False G1994302
TU2282446 lncRNA downstream 21069 8026205 ~ 8038089 (-) False G1994302
TU2282449 lncRNA downstream 21069 8026205 ~ 8038089 (-) False G1994302
TU2282468 lncRNA downstream 28849 8028400 ~ 8030309 (-) True G1994312
TU2282454 lncRNA downstream 31231 8008778 ~ 8027927 (-) False G1994302
TU2282484 lncRNA upstream 1989 8062027 ~ 8062510 (-) True G1994322
TU2282510 lncRNA upstream 59174 8119212 ~ 8120344 (-) False G1994334
TU2282512 lncRNA upstream 59174 8119212 ~ 8120344 (-) True G1994334
TU2282535 lncRNA upstream 85001 8145039 ~ 8148488 (-) True G1994341
TU2282550 lncRNA upstream 106687 8166725 ~ 8167145 (-) True G1994355
XM_036964151.1 mRNA downstream 94139 7943252 ~ 7965019 (-) True LOC110519426
XM_036963594.1 mRNA downstream 121329 7926602 ~ 7937829 (-) True LOC118944417
XM_036964048.1 mRNA upstream 10991 8071029 ~ 8075936 (-) False LOC110518910
XM_036964049.1 mRNA upstream 10991 8071029 ~ 8089566 (-) False LOC110518910
XR_005039823.1 mRNA upstream 19418 8079456 ~ 8080950 (-) True LOC118944485
XM_036964047.1 mRNA upstream 25041 8085079 ~ 8089570 (-) True LOC110518910
XM_036963943.1 mRNA upstream 36936 8096974 ~ 8103779 (-) False LOC118944463
TU2282298 other downstream 186142 7871182 ~ 7873016 (-) True LOC110515105
TU2282311 other downstream 253304 7803844 ~ 7805854 (-) True LOC118944558
TU2282281 other downstream 307781 7749295 ~ 7751377 (-) False LOC110526845
TU2282282 other downstream 307781 7749547 ~ 7751377 (-) True LOC110526845
TU2282226 other downstream 394026 7651386 ~ 7665132 (-) True LOC118936603
TU2282504 other upstream 40282 8100320 ~ 8105982 (-) True LOC118944463
TU2282709 other upstream 630006 8690044 ~ 8691695 (-) False LOC110527031
TU2282717 other upstream 633366 8693404 ~ 8702825 (-) False LOC110527031
TU2282715 other upstream 645389 8705427 ~ 8715137 (-) False LOC110527031
TU2282707 other upstream 673898 8733936 ~ 8748744 (-) False LOC110527031

Expression Profile