RNA id: TU2282749



Basic Information


Item Value
RNA id TU2282749
length 333
lncRNA type intronic
GC content 0.39
exon number 3
gene id G1994509
representative False

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 8672717 ~ 8676597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tctaacatataccctctcctctatactattctaacatataccctctcctctcctctattctaacatataccctctcctctattctattctaacatataccctctcctctattatattctaacatataccctctcctctcctctattctattctaacatataccctctcctctatactattctaacatataccctctcctctcctctcctctcctctatactattctaacatataccctctcctctcctctcctctcctctattctattctaacatataccctctcctctcctctcctctcctctatactattctaacatctaccctctcctct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2282747 lncRNA downstream 16261 8655818 ~ 8656708 (-) True G1994507
TU2282745 lncRNA downstream 27737 8644565 ~ 8645232 (-) True G1994505
TU2282740 lncRNA downstream 43843 8628785 ~ 8629126 (-) True G1994500
TU2282739 lncRNA downstream 45792 8626808 ~ 8627177 (-) True G1994499
TU2282732 lncRNA downstream 78982 8593104 ~ 8593987 (-) True G1994496
TU2282728 lncRNA upstream 3640 8680237 ~ 8680745 (-) True G1994494
TU2282753 lncRNA upstream 4204 8680801 ~ 8681000 (-) True G1994511
TU2282754 lncRNA upstream 4755 8681352 ~ 8681557 (-) True G1994512
TU2282757 lncRNA upstream 9893 8686490 ~ 8688667 (-) True G1994513
TU2282718 lncRNA upstream 16807 8693404 ~ 8696535 (-) False LOC110527031
XR_005039909.1 mRNA downstream 94468 8575215 ~ 8578501 (-) True LOC118944553
XR_005039910.1 mRNA downstream 99410 8571729 ~ 8573559 (-) True LOC118944554
XM_036964178.1 mRNA downstream 529606 8129328 ~ 8143363 (-) False LOC118944505
XM_036964176.1 mRNA downstream 529607 8129329 ~ 8143362 (-) True LOC118944505
XM_036964177.1 mRNA downstream 529609 8129328 ~ 8143360 (-) False LOC118944505
XM_036964523.1 mRNA upstream 105062 8781659 ~ 8783606 (-) False LOC118944550
XM_036964524.1 mRNA upstream 105062 8781659 ~ 8783606 (-) False LOC118944550
XM_036964525.1 mRNA upstream 105062 8781659 ~ 8783606 (-) False LOC118944550
XM_036964526.1 mRNA upstream 105062 8781659 ~ 8783606 (-) True LOC118944550
XR_005039862.1 mRNA upstream 149610 8826207 ~ 8869626 (-) False LOC118936605
TU2282504 other downstream 566987 8100320 ~ 8105982 (-) True LOC118944463
TU2282298 other downstream 799953 7871182 ~ 7873016 (-) True LOC110515105
TU2282311 other downstream 867115 7803844 ~ 7805854 (-) True LOC118944558
TU2282281 other downstream 921592 7749295 ~ 7751377 (-) False LOC110526845
TU2282709 other upstream 13447 8690044 ~ 8691695 (-) False LOC110527031
TU2282717 other upstream 16807 8693404 ~ 8702825 (-) False LOC110527031
TU2282715 other upstream 28830 8705427 ~ 8715137 (-) False LOC110527031
TU2282707 other upstream 57339 8733936 ~ 8748744 (-) False LOC110527031
TU2282708 other upstream 57339 8733936 ~ 8748744 (-) True LOC110527031

Expression Profile