Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005147 |
| length | 1234 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 3 |
| gene id | XLOC_002778 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 24778289 ~ 24784446 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006954 | inflammatory response | biological_process |
| GO:0007160 | cell-matrix adhesion | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-091204-84 | Predicted to be involved in cell-matrix adhesion and inflammatory response. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000140877 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005145 | lncRNA | downstream | 18715 | 24752684 ~ 24759574 (-) | True | XLOC_002776 |
| TCONS_00006047 | lncRNA | downstream | 150851 | 24613973 ~ 24627438 (-) | True | XLOC_002772 |
| TCONS_00005132 | lncRNA | downstream | 332297 | 24439620 ~ 24445992 (-) | True | XLOC_002770 |
| TCONS_00005117 | lncRNA | downstream | 729094 | 24046207 ~ 24049195 (-) | True | XLOC_002764 |
| TCONS_00005116 | lncRNA | downstream | 729166 | 23933778 ~ 24049123 (-) | False | XLOC_002764 |
| TCONS_00005759 | lncRNA | upstream | 49250 | 24833696 ~ 24835335 (-) | False | XLOC_002779 |
| TCONS_00006048 | lncRNA | upstream | 49928 | 24834374 ~ 24852525 (-) | True | XLOC_002779 |
| TCONS_00005760 | lncRNA | upstream | 545136 | 25329582 ~ 25334232 (-) | False | XLOC_002787 |
| TCONS_00006049 | lncRNA | upstream | 545136 | 25329582 ~ 25336184 (-) | False | XLOC_002787 |
| TCONS_00005761 | lncRNA | upstream | 545137 | 25329583 ~ 25330449 (-) | False | XLOC_002787 |
| TCONS_00005146 | mRNA | downstream | 12301 | 24762216 ~ 24765988 (-) | True | XLOC_002777 |
| TCONS_00005144 | mRNA | downstream | 18673 | 24725259 ~ 24759616 (-) | False | XLOC_002776 |
| TCONS_00005143 | mRNA | downstream | 24574 | 24722580 ~ 24753715 (-) | False | XLOC_002776 |
| TCONS_00005142 | mRNA | downstream | 53901 | 24709967 ~ 24724388 (-) | False | XLOC_002776 |
| TCONS_00005141 | mRNA | downstream | 88564 | 24686900 ~ 24689725 (-) | True | XLOC_002775 |
| TCONS_00005148 | mRNA | upstream | 81089 | 24865535 ~ 24868581 (-) | True | XLOC_002780 |
| TCONS_00005149 | mRNA | upstream | 151319 | 24935765 ~ 24937070 (-) | True | XLOC_002781 |
| TCONS_00005150 | mRNA | upstream | 174800 | 24959246 ~ 24961310 (-) | True | XLOC_002782 |
| TCONS_00005151 | mRNA | upstream | 187027 | 24971473 ~ 25028527 (-) | True | XLOC_002783 |
| TCONS_00005152 | mRNA | upstream | 251013 | 25035459 ~ 25069155 (-) | False | XLOC_002784 |
| TCONS_00005133 | other | downstream | 322557 | 24455616 ~ 24455732 (-) | True | XLOC_002771 |
| TCONS_00005130 | other | downstream | 394908 | 24383266 ~ 24383381 (-) | True | XLOC_002768 |
| TCONS_00005129 | other | downstream | 398513 | 24377417 ~ 24379776 (-) | True | XLOC_002767 |
| TCONS_00005104 | other | downstream | 1946860 | 22828366 ~ 22831429 (-) | True | XLOC_002753 |
| TCONS_00005097 | other | downstream | 2025941 | 22752232 ~ 22752348 (-) | True | XLOC_002751 |
| TCONS_00005164 | other | upstream | 709727 | 25494173 ~ 25499474 (-) | True | XLOC_002790 |
| TCONS_00005183 | other | upstream | 1348023 | 26132469 ~ 26141081 (-) | False | XLOC_002799 |
| TCONS_00005187 | other | upstream | 1411838 | 26196284 ~ 26202523 (-) | False | XLOC_002800 |
| TCONS_00005203 | other | upstream | 1959150 | 26743596 ~ 26744131 (-) | True | XLOC_002804 |
| TCONS_00005214 | other | upstream | 2221825 | 27006271 ~ 27009124 (-) | False | XLOC_002814 |
