RNA id: TU2322752


Basic Information

Item Value
RNA id TU2322752
length 422
lncRNA type intronic
GC content 0.48
exon number 1
gene id G2030760
representative True

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 41672264 ~ 41672685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ttacggatgcaggcaatgaggcagtgatcgctgagatcttggttgaagacagcagaggtgtatttagaggggaagttggttaggatgatatctatgagggtgcccatgtttaaggctttggggaggtacctggtaggttcattgataatttgtgtgagattgagggcatcaagtttagattgtaggatggctggggtgttaagcatgttccagtttaggtcgcctagcagcacgagctctgaagatagatggggggcaatcagttcccatatggtgtccagagcacagctgggggcagagggtggtctatagcaggcggcaacggtgagagacttgtttttggagaggtggatttttaaaagtagaagttcaaattgtttgggtacagacctggatagtaggacagaactctgcaggctatc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2322751 lncRNA downstream 313 41671436 ~ 41671951 (-) True G2030759
TU2322740 lncRNA downstream 13153 41658750 ~ 41659111 (-) True G2030752
TU2322734 lncRNA downstream 32228 41639530 ~ 41640036 (-) True G2030746
TU2322686 lncRNA downstream 107427 41557155 ~ 41564837 (-) True G2030698
TU2322684 lncRNA downstream 116311 41554477 ~ 41555953 (-) True G2030697
TU2322756 lncRNA upstream 7443 41680128 ~ 41680516 (-) True G2030764
TU2322757 lncRNA upstream 14513 41687198 ~ 41687693 (-) True G2030765
TU2322764 lncRNA upstream 25788 41698473 ~ 41706716 (-) True G2030770
TU2322766 lncRNA upstream 29861 41702546 ~ 41704147 (-) True G2030771
TU2322775 lncRNA upstream 44157 41716842 ~ 41717182 (-) True G2030777
XM_036963626.1 mRNA downstream 7184 41660302 ~ 41665080 (-) True LOC118944424
XM_036964142.1 mRNA downstream 104317 41462716 ~ 41567947 (-) False LOC110515873
XM_036963874.1 mRNA upstream 50590 41723275 ~ 41738093 (-) True LOC118944455
XM_036964041.1 mRNA upstream 82336 41755021 ~ 41778033 (-) False LOC110506143
XM_036964042.1 mRNA upstream 82336 41755021 ~ 41779868 (-) True LOC110506143
XM_036963847.1 mRNA upstream 154863 41827548 ~ 41862932 (-) False LOC110506142
XM_036963848.1 mRNA upstream 154863 41827548 ~ 41862932 (-) False LOC110506142
TU2322609 other downstream 104351 41542080 ~ 41567913 (-) True LOC110515873
TU2322603 other downstream 209074 41461857 ~ 41463190 (-) False LOC110515873
TU2322188 other downstream 460412 41211477 ~ 41211852 (-) True G2030291
TU2322043 other downstream 765071 40906623 ~ 40907193 (-) True G2030156
TU2322050 other downstream 773243 40898470 ~ 40899021 (-) True G2030162
TU2323116 other upstream 474675 42147360 ~ 42148871 (-) True LOC110506841
TU2323163 other upstream 543754 42216439 ~ 42217465 (-) True LOC118944568
TU2323351 other upstream 670597 42343282 ~ 42346725 (-) False G2031225
TU2323352 other upstream 670597 42343282 ~ 42346725 (-) False G2031225
TU2323354 other upstream 670597 42343282 ~ 42346725 (-) True G2031225

Expression Profile