Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2323699 |
| length | 1012 |
| lncRNA type | antisense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G2031486 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 42907425 ~ 42908463 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
42,905,600
42,906,000
42,906,400
42,906,800
42,907,200
42,907,600
42,908,000
42,908,400
42,908,800
42,909,200
42,909,600
42,910,000
42,910,400
42,910,800
42,911,200
42,911,600
NC_048590.1
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| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2323657 | lncRNA | upstream | 21083 | 42869100 ~ 42886342 (+) | True | LOC110511523 |
| TU2323690 | lncRNA | upstream | 27041 | 42878735 ~ 42880384 (+) | True | G2031477 |
| TU2323601 | lncRNA | upstream | 158852 | 42726882 ~ 42748573 (+) | False | LOC118944566 |
| TU2323604 | lncRNA | upstream | 158852 | 42726882 ~ 42748573 (+) | False | LOC118944566 |
| TU2323603 | lncRNA | upstream | 163497 | 42726882 ~ 42743928 (+) | False | LOC118944566 |
| TU2323722 | lncRNA | downstream | 16982 | 42925445 ~ 42926116 (+) | True | G2031499 |
| TU2323723 | lncRNA | downstream | 18258 | 42926721 ~ 42927168 (+) | True | G2031500 |
| TU2323718 | lncRNA | downstream | 24405 | 42932868 ~ 42934261 (+) | True | G2031496 |
| TU2323734 | lncRNA | downstream | 40028 | 42948491 ~ 42952583 (+) | True | G2031508 |
| TU2323743 | lncRNA | downstream | 53314 | 42961777 ~ 42962021 (+) | True | G2031514 |
| XM_036963434.1 | mRNA | upstream | 20487 | 42801872 ~ 42886938 (+) | False | LOC110511523 |
| XM_036963435.1 | mRNA | upstream | 29180 | 42801871 ~ 42878245 (+) | False | LOC110511523 |
| XM_036963436.1 | mRNA | upstream | 39620 | 42801870 ~ 42867805 (+) | False | LOC110511523 |
| XR_005039921.1 | mRNA | upstream | 166874 | 42730596 ~ 42740551 (+) | False | LOC118944566 |
| XM_036963152.1 | mRNA | upstream | 226036 | 42674297 ~ 42681389 (+) | False | spg21 |
| XM_036964406.1 | mRNA | downstream | 13424 | 42921887 ~ 42930481 (+) | True | LOC110526703 |
| XM_036963689.1 | mRNA | downstream | 176169 | 43084632 ~ 43160907 (+) | False | LOC110515300 |
| XM_036963690.1 | mRNA | downstream | 176169 | 43084632 ~ 43160907 (+) | False | LOC110515300 |
| XM_036963799.1 | mRNA | downstream | 262215 | 43170678 ~ 43179902 (+) | False | LOC110506077 |
| XM_036963800.1 | mRNA | downstream | 262215 | 43170678 ~ 43179902 (+) | True | LOC110506077 |
| TU2323568 | other | upstream | 220297 | 42685638 ~ 42687128 (+) | True | G2031390 |
| TU2323563 | other | upstream | 226040 | 42678213 ~ 42681385 (+) | True | spg21 |
| TU2323556 | other | upstream | 252929 | 42651759 ~ 42654496 (+) | True | G2031381 |
| TU2323200 | other | upstream | 587024 | 42319310 ~ 42320401 (+) | True | G2031110 |
| TU2322399 | other | upstream | 1185044 | 41706100 ~ 41722381 (+) | True | LOC110526920 |
| TU2324456 | other | downstream | 630527 | 43538990 ~ 43539362 (+) | True | G2032117 |
| TU2324644 | other | downstream | 868124 | 43776587 ~ 43777009 (+) | True | LOC110506879 |
| TU2325506 | other | downstream | 1722012 | 44630475 ~ 44630763 (+) | True | G2033013 |
| TU2325681 | other | downstream | 2054607 | 44963070 ~ 44967510 (+) | False | LOC110516695 |
| TU2325692 | other | downstream | 2064429 | 44972892 ~ 44973711 (+) | True | G2033166 |
