RNA id: TU2324292



Basic Information


Item Value
RNA id TU2324292
length 823
RNA type TUCP
GC content 0.42
exon number 2
gene id G2031974
representative True

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 43184636 ~ 43185724 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TTAGGAGAGTCTGTGAACTTACCACCCACTCTGACCAATTAGGAGAGTCTGTGAACTTACCACCCACTCTGACCAATTAGGAGAGTGTGAACTTACCACCCACTCTGACCAATTAaagatggaatccgcagtaGGGGGAAATGGTgccactggctgccccaccagcattgttattgttgttgctgAGCTGAGGAGCGTCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTACTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTACTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTACTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGTTCCTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGTTCCTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGTTCTTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGTTCCTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGTTCCTCTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGCTCTACTATCGTGCAGCATGGTTATGAAATGCAGTACATATTGTGTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2324290 lncRNA downstream 7570 43176713 ~ 43177066 (-) True G2031972
TU2324287 lncRNA downstream 10447 43173929 ~ 43174189 (-) True G2031969
TU2324283 lncRNA downstream 13731 43170672 ~ 43170905 (-) True G2031965
TU2324281 lncRNA downstream 14200 43170138 ~ 43170436 (-) True G2031963
TU2324276 lncRNA downstream 23739 43160474 ~ 43160897 (-) True G2031961
TU2324299 lncRNA upstream 9999 43195723 ~ 43196866 (-) True G2031978
TU2324304 lncRNA upstream 19936 43205660 ~ 43205874 (-) True G2031983
TU2324368 lncRNA upstream 206586 43392310 ~ 43392543 (-) True G2032041
TU2324371 lncRNA upstream 221775 43407499 ~ 43407759 (-) True G2032044
TU2324372 lncRNA upstream 223931 43409655 ~ 43410059 (-) True G2032045
XM_036963628.1 mRNA downstream 21624 43161768 ~ 43163012 (-) True LOC118944425
XM_036963627.1 mRNA downstream 197354 42964294 ~ 42987282 (-) True LOC110526985
XM_036964081.1 mRNA downstream 229932 42940158 ~ 42954704 (-) True LOC110526700
XM_036964082.1 mRNA downstream 230057 42940157 ~ 42954579 (-) False LOC110526700
XM_036963578.1 mRNA downstream 267811 42906669 ~ 42916825 (-) True LOC110526696
XM_036963200.1 mRNA upstream 242934 43428658 ~ 43439196 (-) True LOC110506867
LOC118944426 mRNA upstream 595206 43780930 ~ 43792853 (-) True LOC118944426
XM_036963442.1 mRNA upstream 710291 43896015 ~ 43949012 (-) False LOC110526988
XM_036963439.1 mRNA upstream 713687 43899411 ~ 43949007 (-) False LOC110526988
XM_036963441.1 mRNA upstream 713687 43899411 ~ 43949011 (-) False LOC110526988
TU2323769 other downstream 563090 42616244 ~ 42621546 (-) True LOC110513924
TU2323493 other downstream 625733 42557797 ~ 42558903 (-) True G2031343
TU2323433 other downstream 723321 42459257 ~ 42461315 (-) True G2031286
TU2323389 other downstream 814727 42368254 ~ 42369909 (-) True G2031259
TU2323352 other downstream 837911 42343282 ~ 42346725 (-) False G2031225
TU2324286 other upstream 5974 43191698 ~ 43197828 (-) True LOC110506858
TU2324491 other upstream 383436 43569160 ~ 43570054 (-) True G2032150
TU2324940 other upstream 693469 43879193 ~ 43881732 (-) True G2032544
TU2324949 other upstream 713776 43899500 ~ 43905240 (-) False LOC110526988
TU2325823 other upstream 1668129 44853853 ~ 44923017 (-) True LOC110506903

Expression Profile