RNA id: TU2351274


Basic Information

Item Value
RNA id TU2351274
length 513
lncRNA type sense_over
GC content 0.43
exon number 2
gene id LOC110507187
representative False

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 14960014 ~ 14962018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGGGGTTAGGATAAATGGAAGATTAAGATCGGCGAACTGCACTCACCTTTCGTCCGACtctttgttgtgtgtgtttcattAATTTTCTAAATTTTTCCATAGTAATCCATCACAAAGTTTGGGACAGAGTACTGTAACTGTAATGCGATGAGTACTGTTTTGTATTTTCATATGCAGCCTTGCGCACTTTTCAGAATATGGGAAGTGTTTTTCCCCTGCATGCGGTCATTGTCCAGTCCTAGTTGGAGATTACACAGAAAAGGAAAGGAATGTGAGATAGTCAGCTCAGCTGTTGATGTTTTTCTGTTGTTTGCCCTGAATCCTTCCTGCTTCTCTACACAGTTGCGGCATAAGGACTTTCTtgtacccctccctctcttttcactcACAAGTATAACAGAGCCTATAGGACATGGGAAACACAGGAGAACAAAGGTAGGGTGCACCCAATAGCACCTCCGCTACGCTACCCGACAGAACAGACCCACTTCTCTTTTTCTTAAACAATCGCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2351252 lncRNA downstream 28553 14926331 ~ 14932240 (-) True G2055842
TU2351202 lncRNA downstream 98310 14859087 ~ 14862483 (-) True G2055796
TU2351179 lncRNA downstream 191658 14767016 ~ 14769135 (-) True G2055774
TU2351162 lncRNA downstream 203523 14755618 ~ 14757270 (-) True G2055759
TU2350370 lncRNA downstream 567788 14391271 ~ 14393005 (-) True LOC110507166
TU2351326 lncRNA upstream 129098 15090869 ~ 15124225 (-) True LOC110507083
TU2351402 lncRNA upstream 215742 15177513 ~ 15177739 (-) True G2055984
TU2351403 lncRNA upstream 216922 15178693 ~ 15178920 (-) True G2055985
TU2351542 lncRNA upstream 409577 15371348 ~ 15372101 (-) False G2056114
TU2351543 lncRNA upstream 409577 15371348 ~ 15372140 (-) False G2056114
XM_021587032.2 mRNA downstream 139882 14788127 ~ 14820911 (-) False LOC110507159
XM_021587033.2 mRNA downstream 139882 14788127 ~ 14820911 (-) True LOC110507159
XM_036965538.1 mRNA downstream 241268 14534063 ~ 14719525 (-) False LOC110507082
XM_036965740.1 mRNA upstream 128982 15090753 ~ 15161063 (-) False LOC110507083
XR_005040090.1 mRNA upstream 135437 15097208 ~ 15161069 (-) False LOC110507083
XM_021587046.2 mRNA upstream 207556 15169327 ~ 15175119 (-) True LOC110507165
XM_021587076.2 mRNA upstream 225922 15187693 ~ 15195836 (-) True LOC110507178
XM_021587058.2 mRNA upstream 236727 15198498 ~ 15202774 (-) True LOC110507168
TU2351045 other downstream 425553 14532987 ~ 14535240 (-) True LOC110507082
TU2349697 other downstream 1203096 13756175 ~ 13757697 (-) True LOC110507619
TU2349554 other downstream 1433358 13490771 ~ 13527435 (-) True LOC110507606
TU2349534 other downstream 1488841 13468224 ~ 13471952 (-) False G2054301
TU2351551 other upstream 414444 15376215 ~ 15376515 (-) True G2056115
TU2353838 other upstream 2033789 16995560 ~ 16999785 (-) True LOC110507646
TU2354252 other upstream 2502750 17464521 ~ 17469821 (-) True LOC110507661
TU2354506 other upstream 2960571 17922342 ~ 17922752 (-) True G2058724
TU2358439 other upstream 5952343 20914114 ~ 20922375 (-) True LOC110507754

Expression Profile