Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2339920 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G2045540 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 6520599 ~ 6520820 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2339905 | lncRNA | upstream | 22067 | 6498329 ~ 6498532 (+) | True | G2045525 |
| TU2339900 | lncRNA | upstream | 28176 | 6492094 ~ 6492423 (+) | True | G2045520 |
| TU2339883 | lncRNA | upstream | 68365 | 6452032 ~ 6452234 (+) | True | G2045506 |
| TU2339827 | lncRNA | upstream | 170257 | 6349846 ~ 6350342 (+) | True | G2045453 |
| TU2339761 | lncRNA | upstream | 273719 | 6240522 ~ 6246880 (+) | True | LOC110507411 |
| TU2339924 | lncRNA | downstream | 4116 | 6524936 ~ 6525170 (+) | True | G2045544 |
| TU2339930 | lncRNA | downstream | 14862 | 6535682 ~ 6535889 (+) | True | G2045550 |
| TU2339934 | lncRNA | downstream | 21504 | 6542324 ~ 6542602 (+) | True | G2045554 |
| TU2339971 | lncRNA | downstream | 82800 | 6603620 ~ 6604157 (+) | True | G2045591 |
| TU2339980 | lncRNA | downstream | 96981 | 6617801 ~ 6621645 (+) | True | G2045598 |
| XM_021587397.2 | mRNA | upstream | 178790 | 6334332 ~ 6341809 (+) | False | LOC110507414 |
| XM_021587398.2 | mRNA | upstream | 178790 | 6336272 ~ 6341809 (+) | True | LOC110507414 |
| XM_021587399.2 | mRNA | upstream | 196119 | 6295838 ~ 6324480 (+) | True | LOC110507416 |
| XM_021587395.2 | mRNA | upstream | 255380 | 6247615 ~ 6265219 (+) | True | LOC110507412 |
| XR_002471122.2 | mRNA | upstream | 273716 | 6240480 ~ 6246883 (+) | False | LOC110507411 |
| XM_021587401.2 | mRNA | downstream | 8935 | 6529755 ~ 6569243 (+) | True | LOC110507417 |
| XM_021587410.2 | mRNA | downstream | 55609 | 6576429 ~ 6592527 (+) | True | calm3a |
| XM_036965377.1 | mRNA | downstream | 185844 | 6706664 ~ 6719264 (+) | False | rtn2a |
| XM_036965378.1 | mRNA | downstream | 185844 | 6706664 ~ 6719264 (+) | False | rtn2a |
| XM_036965379.1 | mRNA | downstream | 190633 | 6711453 ~ 6719264 (+) | False | rtn2a |
| TU2339902 | other | upstream | 25465 | 6494833 ~ 6495134 (+) | True | G2045522 |
| TU2339435 | other | upstream | 613360 | 5897517 ~ 5907239 (+) | True | LOC110507398 |
| TU2339431 | other | upstream | 624486 | 5891847 ~ 5896113 (+) | False | LOC110507397 |
| TU2339420 | other | upstream | 624486 | 5893023 ~ 5896113 (+) | True | LOC110507397 |
| TU2337847 | other | upstream | 1829472 | 4685915 ~ 4691127 (+) | True | LOC110507374 |
| TU2340040 | other | downstream | 171724 | 6692544 ~ 6693044 (+) | True | G2045655 |
| TU2340054 | other | downstream | 198944 | 6719764 ~ 6720692 (+) | True | G2045665 |
| TU2340813 | other | downstream | 724986 | 7245806 ~ 7251575 (+) | False | G2046345 |
| TU2340814 | other | downstream | 724986 | 7245806 ~ 7251575 (+) | True | G2046345 |
| TU2340853 | other | downstream | 735811 | 7256631 ~ 7258230 (+) | True | G2046384 |
