RNA id: TU2341056


Basic Information

Item Value
RNA id TU2341056
length 210
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G2046579
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 7611358 ~ 7611567 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gatgaaaaaaaacaaatgtgaaaaaGTTGTGGGTATAGCGTTTTAAAAATACACTCTTCATTTAGACTTGTACCGCAGTAGAATGCAACTAGCATATAATTGCAAACATACAGTGCttttgggaagtattcagaccccttgactttttccacattttgttacgttacagccttgttctaaaatgtattaaataaataacaaatcctcagc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2341052 lncRNA upstream 5123 7606035 ~ 7606235 (+) True G2046575
TU2341003 lncRNA upstream 98579 7512567 ~ 7512779 (+) True G2046526
TU2340944 lncRNA upstream 175836 7433976 ~ 7435522 (+) True G2046474
TU2340943 lncRNA upstream 178225 7432795 ~ 7433133 (+) True G2046473
TU2340942 lncRNA upstream 178914 7432050 ~ 7432444 (+) True G2046472
TU2341070 lncRNA downstream 15669 7627236 ~ 7627632 (+) True G2046592
TU2341071 lncRNA downstream 16364 7627931 ~ 7628147 (+) True G2046593
TU2341073 lncRNA downstream 18255 7629822 ~ 7630045 (+) True G2046595
TU2341556 lncRNA downstream 35210 7646777 ~ 7647040 (+) True G2047042
TU2341563 lncRNA downstream 39852 7651419 ~ 7651628 (+) True G2047049
XM_036964692.1 mRNA upstream 79915 7518237 ~ 7531443 (+) False LOC110507446
XM_021587455.2 mRNA downstream 608277 8219844 ~ 8222436 (+) True LOC110507452
XM_036965591.1 mRNA downstream 675881 8287448 ~ 8292186 (+) True LOC110507457
XM_021587462.2 mRNA downstream 994983 8606550 ~ 8741529 (+) False si:cabz01090165.1
XM_021587463.2 mRNA downstream 1177029 8788596 ~ 8791813 (+) True LOC110507459
XM_036965105.1 mRNA downstream 1346839 8958406 ~ 9033108 (+) False LOC110507061
TU2340853 other upstream 353128 7256631 ~ 7258230 (+) True G2046384
TU2340813 other upstream 359783 7245806 ~ 7251575 (+) False G2046345
TU2340814 other upstream 359783 7245806 ~ 7251575 (+) True G2046345
TU2340054 other upstream 890666 6719764 ~ 6720692 (+) True G2045665
TU2340040 other upstream 918314 6692544 ~ 6693044 (+) True G2045655
TU2342940 other downstream 995926 8607493 ~ 8724303 (+) False si:cabz01090165.1
TU2344007 other downstream 1796058 9407625 ~ 9408571 (+) True G2049339
TU2344344 other downstream 2176239 9787806 ~ 9788115 (+) True G2049657
TU2344911 other downstream 2667543 10279110 ~ 10282186 (+) False LOC110507067
TU2344916 other downstream 2667543 10279110 ~ 10282483 (+) True LOC110507067

Expression Profile