Item | Value |
---|---|
RNA id | TCONS_00005202 |
length | 1785 |
RNA type | mRNA |
GC content | 0.44 |
exon number | 4 |
gene id | XLOC_002804 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007121.7 |
NCBI id | CM002894.2 |
chromosome length | 45420867 |
location | 26716362 ~ 26744166 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:1905150 | regulation of voltage-gated sodium channel activity | biological_process |
GO:0005576 | extracellular region | cellular_component |
GO:0005634 | nucleus | cellular_component |
GO:0005737 | cytoplasm | cellular_component |
GO:0017080 | sodium channel regulator activity | molecular_function |
GO:0008083 | growth factor activity | molecular_function |
id | description |
---|---|
ZDB-GENE-040426-1793 | Predicted to enable sodium channel regulator activity. Predicted to be involved in regulation of voltage-gated sodium channel activity. Predicted to act upstream of or within nervous system development. Predicted to be located in several cellular components, including filopodium; growth cone; and microtubule. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including blood; nervous system; neural rod; segmental plate; and trigeminal placode. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy. Orthologous to human FGF13 (fibroblast growth factor 13). |
ensembl_id | ENSDART00000145532 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00006056 | lncRNA | downstream | 269448 | 26441052 ~ 26447171 (-) | True | XLOC_002802 |
TCONS_00006055 | lncRNA | downstream | 269506 | 26441052 ~ 26447113 (-) | False | XLOC_002802 |
TCONS_00006054 | lncRNA | downstream | 574022 | 26132469 ~ 26142597 (-) | False | XLOC_002799 |
TCONS_00005184 | lncRNA | downstream | 574022 | 26141070 ~ 26142597 (-) | True | XLOC_002799 |
TCONS_00005171 | lncRNA | downstream | 1017260 | 25697159 ~ 25699359 (-) | False | XLOC_002794 |
TCONS_00006057 | lncRNA | upstream | 106906 | 26836836 ~ 26872413 (-) | True | XLOC_002807 |
TCONS_00005206 | lncRNA | upstream | 162637 | 26892567 ~ 26895076 (-) | True | XLOC_002808 |
TCONS_00006058 | lncRNA | upstream | 171342 | 26901272 ~ 26902305 (-) | True | XLOC_002809 |
TCONS_00006059 | lncRNA | upstream | 261879 | 26991809 ~ 26999496 (-) | False | XLOC_002812 |
TCONS_00005211 | lncRNA | upstream | 270632 | 27000562 ~ 27002404 (-) | False | XLOC_002813 |
TCONS_00005197 | mRNA | downstream | 203626 | 26504792 ~ 26512993 (-) | False | XLOC_002803 |
TCONS_00005196 | mRNA | downstream | 203626 | 26504792 ~ 26512993 (-) | True | XLOC_002803 |
TCONS_00005195 | mRNA | downstream | 203877 | 26502334 ~ 26512742 (-) | False | XLOC_002803 |
TCONS_00005194 | mRNA | downstream | 442525 | 26269532 ~ 26274094 (-) | True | XLOC_002801 |
TCONS_00005193 | mRNA | downstream | 442990 | 26269072 ~ 26273629 (-) | False | XLOC_002801 |
TCONS_00005204 | mRNA | upstream | 32863 | 26762793 ~ 26766780 (-) | True | XLOC_002805 |
TCONS_00005205 | mRNA | upstream | 41117 | 26771047 ~ 26793448 (-) | True | XLOC_002806 |
TCONS_00005207 | mRNA | upstream | 252324 | 26982254 ~ 26985231 (-) | True | XLOC_002810 |
TCONS_00005208 | mRNA | upstream | 257178 | 26987108 ~ 26989875 (-) | True | XLOC_002811 |
TCONS_00005209 | mRNA | upstream | 261875 | 26991805 ~ 26997344 (-) | False | XLOC_002812 |
TCONS_00005187 | other | downstream | 514096 | 26196284 ~ 26202523 (-) | False | XLOC_002800 |
TCONS_00005183 | other | downstream | 575538 | 26132469 ~ 26141081 (-) | False | XLOC_002799 |
TCONS_00005164 | other | downstream | 1217145 | 25494173 ~ 25499474 (-) | True | XLOC_002790 |
TCONS_00005133 | other | downstream | 2260887 | 24455616 ~ 24455732 (-) | True | XLOC_002771 |
TCONS_00005130 | other | downstream | 2333238 | 24383266 ~ 24383381 (-) | True | XLOC_002768 |
TCONS_00005203 | other | upstream | 13666 | 26743596 ~ 26744131 (-) | True | XLOC_002804 |
TCONS_00005214 | other | upstream | 276341 | 27006271 ~ 27009124 (-) | False | XLOC_002814 |
TCONS_00005218 | other | upstream | 440026 | 27169956 ~ 27170072 (-) | True | XLOC_002817 |
TCONS_00005228 | other | upstream | 684316 | 27414246 ~ 27414362 (-) | True | XLOC_002819 |
TCONS_00005237 | other | upstream | 1468964 | 28198894 ~ 28199041 (-) | False | XLOC_002823 |