RNA id: TU2367303



Basic Information


Item Value
RNA id TU2367303
length 661
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G2070353
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 27832835 ~ 27833495 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtgtgagattgagggcatcaagtttagattgtaggatggctggggtgttaagcatgttccagtttaggttgcctagcagcacgagctctgaagatagatggggggcaatcagttcacatatggtgtccagagcacagctgggggcagagggtggtctatagcaggcggcaacggtgagagacttgtttttagagaggtggatttttaaaagtagaagttcaaattgtttgggtacagacctggatagtaggacagaactctgcaggctatctttgcagtagattgcaacaccgccccctttggcagttctatcttgtctgaaaatattgtagtttggaattaaaatgtctgaatttttggtggtcttcctaagccaggattcagacacagctagaacatccgggttggcagagtgtgctaaagcagtgaatagaacaaacttagggaggaggcttctaatgttaacatgcatgaaaccaaggctattacggttacagaagtcgtcaaaagagagcgcctggggaataggagtggagctaggcactgcagggcctggattcacctctacatcgccagaggaacataggaggagtagaataagggtgtgactaaaagcaataagaattggtcgtctagaacgtctggaacagagagtaaaagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2367289 lncRNA downstream 29181 27753068 ~ 27803654 (-) True G2070342
TU2367294 lncRNA downstream 39356 27770159 ~ 27793479 (-) True G2070346
TU2367290 lncRNA downstream 43792 27755443 ~ 27789043 (-) True G2070343
TU2367286 lncRNA downstream 88580 27743988 ~ 27744255 (-) True G2070339
TU2367285 lncRNA downstream 90054 27742552 ~ 27742781 (-) True G2070338
TU2367304 lncRNA upstream 398 27833893 ~ 27921841 (-) True G2070354
TU2367324 lncRNA upstream 51997 27885492 ~ 27886330 (-) True LOC118944700
TU2367328 lncRNA upstream 66562 27900057 ~ 27900680 (-) True G2070374
TU2367388 lncRNA upstream 160959 27994454 ~ 27994718 (-) True G2070420
TU2367392 lncRNA upstream 163736 27997231 ~ 27997702 (-) True G2070424
XM_036965086.1 mRNA downstream 9074 27816137 ~ 27823761 (-) True LOC118944706
XM_036965085.1 mRNA downstream 14126 27817113 ~ 27818709 (-) True LOC118944705
XM_036965084.1 mRNA downstream 19572 27811641 ~ 27813263 (-) True LOC118944704
XM_036965071.1 mRNA downstream 34236 27796265 ~ 27798599 (-) True LOC118944697
XM_036964654.1 mRNA downstream 46421 27783271 ~ 27786414 (-) True LOC118944650
XM_036965078.1 mRNA upstream 3666 27837161 ~ 27839026 (-) True LOC118944702
XM_036964656.1 mRNA upstream 6070 27839565 ~ 27844424 (-) True LOC118944651
XM_036965081.1 mRNA upstream 17838 27851333 ~ 27855315 (-) False LOC118944703
XM_036965079.1 mRNA upstream 17842 27851337 ~ 27855315 (-) False LOC118944703
XM_036965080.1 mRNA upstream 17843 27851338 ~ 27855315 (-) True LOC118944703
TU2366760 other downstream 292226 27540000 ~ 27540609 (-) True G2069842
TU2366602 other downstream 372187 27448220 ~ 27460648 (-) False LOC110507887
TU2366604 other downstream 385337 27434255 ~ 27447498 (-) True LOC110507886
TU2366607 other downstream 399705 27430172 ~ 27433130 (-) False LOC110507886
TU2366532 other downstream 428457 27349973 ~ 27404378 (-) True LOC110507885
TU2367315 other upstream 35729 27869224 ~ 27870095 (-) True LOC118944698
TU2367316 other upstream 39214 27872709 ~ 27889358 (-) True LOC118944653
TU2367516 other upstream 337343 28170838 ~ 28172542 (-) True G2070530
TU2367763 other upstream 690451 28523946 ~ 28524550 (-) True G2070744
TU2368344 other upstream 1107859 28941354 ~ 28942728 (-) False G2071247

Expression Profile