RNA id: TU2369519



Basic Information


Item Value
RNA id TU2369519
length 408
lncRNA type antisense_over
GC content 0.32
exon number 2
gene id G2072288
representative False

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 29822517 ~ 29833885 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTCAAACAGAGTTTAATGCAGATGATTGACATATCAAAACATGGGTTTGAGTGGCTAAATGAATTCAGTGACTTGGAGTGTAACTTTATAATCTGAAACTGAACATGTAAAACCACCAATAACTTTAATTCAAACTGAAATGTACCTCATATAATATACACGTTTGACATTCAGggtcacataaaaaaaaaaaggtagcaAGTACTCTAGAAAGTATACAAAGGATAATTAAAACACTATGGAAATGTCTCATTGGCAGAACACTATATTATGGATCATAGAaaaagtcaaatcaaatgcaAACATTTAAAACAAATAGCATCATAATATGTCCATATTGTACACAAATCTCCAGATGGCAAAAATACAAgtctgagtgtgtttgtgtgtgtatgggttgtctcttat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2369494 lncRNA downstream 116008 29705619 ~ 29706509 (-) True G2072267
TU2369166 lncRNA downstream 156764 29664575 ~ 29665753 (-) True G2071993
TU2369152 lncRNA downstream 165083 29657111 ~ 29657434 (-) True G2071983
TU2369092 lncRNA downstream 190683 29626155 ~ 29631834 (-) False zgc:165508
TU2369093 lncRNA downstream 190683 29626155 ~ 29631834 (-) False zgc:165508
TU2369524 lncRNA upstream 3477 29837362 ~ 29837950 (-) True G2072292
TU2369527 lncRNA upstream 4372 29838257 ~ 29838479 (-) True G2072294
TU2369528 lncRNA upstream 5266 29839151 ~ 29839519 (-) True G2072295
TU2369529 lncRNA upstream 6027 29839912 ~ 29840192 (-) True G2072296
TU2369531 lncRNA upstream 7609 29841494 ~ 29841753 (-) True G2072298
XM_021588341.2 mRNA downstream 44871 29756570 ~ 29777646 (-) True LOC110507921
XM_036965843.1 mRNA downstream 66430 29683759 ~ 29756087 (-) False LOC110507923
XM_036965852.1 mRNA downstream 66430 29683759 ~ 29756087 (-) True LOC110507923
XM_036965854.1 mRNA downstream 66742 29683759 ~ 29755775 (-) False LOC110507923
XM_036965842.1 mRNA downstream 68462 29683759 ~ 29754055 (-) False LOC110507923
XM_036965821.1 mRNA upstream 20572 29854457 ~ 29860929 (-) True LOC110507919
XM_021588337.2 mRNA upstream 46769 29880654 ~ 29884496 (-) True LOC110507916
XM_021588354.2 mRNA upstream 97742 29931627 ~ 29932989 (-) True LOC110507932
XM_036964847.1 mRNA upstream 103018 29936903 ~ 29972052 (-) False LOC110507928
XM_036964846.1 mRNA upstream 103018 29936903 ~ 29972053 (-) True LOC110507928
TU2369096 other downstream 171050 29631912 ~ 29651467 (-) False zgc:165508
TU2369099 other downstream 171050 29631994 ~ 29651467 (-) True zgc:165508
TU2369097 other downstream 171972 29631912 ~ 29650545 (-) False zgc:165508
TU2368344 other downstream 879789 28941354 ~ 28942728 (-) False G2071247
TU2367763 other downstream 1297967 28523946 ~ 28524550 (-) True G2070744
TU2370034 other upstream 561890 30395775 ~ 30396680 (-) True G2072732
TU2371806 other upstream 2193743 32027628 ~ 32027967 (-) True G2074300
TU2373899 other upstream 3044904 32878789 ~ 32880888 (-) True G2076236
TU2375411 other upstream 5282497 35116382 ~ 35154043 (-) True G2077617
TU2375787 other upstream 5600989 35434874 ~ 35435212 (-) True G2077934

Expression Profile