RNA id: TU2375739



Basic Information


Item Value
RNA id TU2375739
length 391
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G2077892
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35351380 ~ 35353524 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AAACAAAATTCAGTATGTAGAGTCACCAGCTTGATGTCGTCATGGGAATGTGGGACTTTGATTATATGGAATACGCTATAAGTGAATTTATCCAGATACacattcaaatggggggactctacagtagatacacattcaaatggggggactctaCTGTAGATACACCTTAAAAAGGCCAGATTCTACTGTAGATACACCTTCAAATGGGGGAACTCTACTGCAGAtacaccttcaaatggggggactctactgtagatacacattcaaatggggggactctaCTGTAGATACACATTCAAATGGGGGAACTCTACTGTAGATACacattcaaatggggggactctacTGTAGATACACATTCAAATGGGGGAACTCTACAGTAGATACACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2375723 lncRNA downstream 26989 35323813 ~ 35324391 (-) True G2077877
TU2375662 lncRNA downstream 144132 35203729 ~ 35207248 (-) True G2077819
TU2375652 lncRNA downstream 174024 35169376 ~ 35177356 (-) True LOC110507210
TU2375434 lncRNA downstream 186945 35160746 ~ 35164435 (-) True G2077636
TU2375433 lncRNA downstream 192119 35159019 ~ 35159261 (-) True G2077635
TU2375767 lncRNA upstream 46413 35399937 ~ 35400178 (-) True G2077917
TU2375781 lncRNA upstream 72742 35426266 ~ 35429747 (-) True G2077929
TU2375785 lncRNA upstream 79580 35433104 ~ 35433361 (-) True G2077932
TU2375788 lncRNA upstream 81732 35435256 ~ 35435515 (-) True G2077935
TU2375791 lncRNA upstream 84159 35437683 ~ 35536886 (-) False G2077938
XM_036965804.1 mRNA downstream 20763 35248879 ~ 35330617 (-) False LOC110507210
XM_036965796.1 mRNA downstream 20766 35169232 ~ 35330614 (-) False LOC110507210
XM_036965797.1 mRNA downstream 20766 35169232 ~ 35330614 (-) False LOC110507210
XM_036965801.1 mRNA downstream 20766 35169232 ~ 35330614 (-) False LOC110507210
XM_036965798.1 mRNA downstream 20766 35171163 ~ 35330614 (-) False LOC110507210
XR_002471097.2 mRNA upstream 429969 35783493 ~ 35787697 (-) True LOC110507269
XM_021588406.2 mRNA upstream 722619 36076143 ~ 36107044 (-) True LOC110507979
LOC110507212 mRNA upstream 754192 36107716 ~ 36108445 (-) True LOC110507212
XM_036965427.1 mRNA upstream 779213 36132737 ~ 36262873 (-) False LOC110507213
XM_036965426.1 mRNA upstream 779213 36132737 ~ 36264360 (-) False LOC110507213
TU2375411 other downstream 197337 35116382 ~ 35154043 (-) True G2077617
TU2373899 other downstream 2470492 32878789 ~ 32880888 (-) True G2076236
TU2371806 other downstream 3323413 32027628 ~ 32027967 (-) True G2074300
TU2370034 other downstream 4954700 30395775 ~ 30396680 (-) True G2072732
TU2369518 other downstream 5519671 29830102 ~ 29831709 (-) True G2072288
TU2375787 other upstream 81350 35434874 ~ 35435212 (-) True G2077934
TU2375789 other upstream 82070 35435594 ~ 35436257 (-) True G2077936
TU2376010 other upstream 373332 35726856 ~ 35727482 (-) True G2078119
TU2376118 other upstream 473592 35827116 ~ 35827711 (-) True G2078218
TU2376170 other upstream 505378 35858902 ~ 35863277 (-) False G2078260

Expression Profile