RNA id: TU2375767



Basic Information


Item Value
RNA id TU2375767
length 242
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G2077917
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35399937 ~ 35400178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACACTATGGACATCATATCTATCTGAGATATCATGCACTATGGACATCATATCTATCTGAGATATCATGCACTATGGACATCATATCTATCTGAGATATCATGCACTATGGACATCATATCTATCTGAGATATCATGCACTATGGATATCATTTCTATCTGAGATATCATACACTATGGACATCATATCTACCTGAGATATCATACACTATGGACATCATATCTATCTGAGATATCATACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2375739 lncRNA downstream 46413 35351380 ~ 35353524 (-) True G2077892
TU2375723 lncRNA downstream 75546 35323813 ~ 35324391 (-) True G2077877
TU2375662 lncRNA downstream 192689 35203729 ~ 35207248 (-) True G2077819
TU2375652 lncRNA downstream 222581 35169376 ~ 35177356 (-) True LOC110507210
TU2375434 lncRNA downstream 235502 35160746 ~ 35164435 (-) True G2077636
TU2375781 lncRNA upstream 26088 35426266 ~ 35429747 (-) True G2077929
TU2375785 lncRNA upstream 32926 35433104 ~ 35433361 (-) True G2077932
TU2375788 lncRNA upstream 35078 35435256 ~ 35435515 (-) True G2077935
TU2375791 lncRNA upstream 37505 35437683 ~ 35536886 (-) False G2077938
TU2375793 lncRNA upstream 37505 35437683 ~ 35536886 (-) False G2077938
XM_036965804.1 mRNA downstream 69320 35248879 ~ 35330617 (-) False LOC110507210
XM_036965799.1 mRNA downstream 69323 35171163 ~ 35330614 (-) False LOC110507210
XR_002471097.2 mRNA upstream 383315 35783493 ~ 35787697 (-) True LOC110507269
XM_021588406.2 mRNA upstream 675965 36076143 ~ 36107044 (-) True LOC110507979
LOC110507212 mRNA upstream 707538 36107716 ~ 36108445 (-) True LOC110507212
XM_036965427.1 mRNA upstream 732559 36132737 ~ 36262873 (-) False LOC110507213
XM_036965426.1 mRNA upstream 732559 36132737 ~ 36264360 (-) False LOC110507213
TU2375411 other downstream 245894 35116382 ~ 35154043 (-) True G2077617
TU2373899 other downstream 2519049 32878789 ~ 32880888 (-) True G2076236
TU2371806 other downstream 3371970 32027628 ~ 32027967 (-) True G2074300
TU2370034 other downstream 5003257 30395775 ~ 30396680 (-) True G2072732
TU2369518 other downstream 5568228 29830102 ~ 29831709 (-) True G2072288
TU2375787 other upstream 34696 35434874 ~ 35435212 (-) True G2077934
TU2375789 other upstream 35416 35435594 ~ 35436257 (-) True G2077936
TU2376010 other upstream 326678 35726856 ~ 35727482 (-) True G2078119
TU2376118 other upstream 426938 35827116 ~ 35827711 (-) True G2078218
TU2376170 other upstream 458724 35858902 ~ 35863277 (-) False G2078260

Expression Profile