RNA id: TU2375912



Basic Information


Item Value
RNA id TU2375912
length 221
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G2078040
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35584795 ~ 35607641 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccttgctgtccccagtccacctgtccgtgctgctgctccagtttcaactgacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2375791 lncRNA downstream 47909 35437683 ~ 35536886 (-) False G2077938
TU2375793 lncRNA downstream 47909 35437683 ~ 35536886 (-) False G2077938
TU2375792 lncRNA downstream 47909 35536165 ~ 35536886 (-) True G2077938
TU2375841 lncRNA downstream 62144 35522171 ~ 35522651 (-) True G2077973
TU2375825 lncRNA downstream 101149 35482344 ~ 35483646 (-) True G2077959
TU2375946 lncRNA upstream 63025 35670666 ~ 35670897 (-) True G2078073
TU2375956 lncRNA upstream 69643 35677284 ~ 35677596 (-) True G2078083
TU2376011 lncRNA upstream 120999 35728640 ~ 35728951 (-) True G2078120
TU2376015 lncRNA upstream 122863 35730504 ~ 35730722 (-) True G2078124
TU2376031 lncRNA upstream 133448 35741089 ~ 35741333 (-) True G2078136
XM_036965804.1 mRNA downstream 254178 35248879 ~ 35330617 (-) False LOC110507210
XM_036965799.1 mRNA downstream 254181 35171163 ~ 35330614 (-) False LOC110507210
XR_002471097.2 mRNA upstream 175852 35783493 ~ 35787697 (-) True LOC110507269
XM_021588406.2 mRNA upstream 468502 36076143 ~ 36107044 (-) True LOC110507979
LOC110507212 mRNA upstream 500075 36107716 ~ 36108445 (-) True LOC110507212
XM_036965427.1 mRNA upstream 525096 36132737 ~ 36262873 (-) False LOC110507213
XM_036965426.1 mRNA upstream 525096 36132737 ~ 36264360 (-) False LOC110507213
TU2375789 other downstream 148538 35435594 ~ 35436257 (-) True G2077936
TU2375787 other downstream 149583 35434874 ~ 35435212 (-) True G2077934
TU2375411 other downstream 430752 35116382 ~ 35154043 (-) True G2077617
TU2373899 other downstream 2703907 32878789 ~ 32880888 (-) True G2076236
TU2371806 other downstream 3556828 32027628 ~ 32027967 (-) True G2074300
TU2376010 other upstream 119215 35726856 ~ 35727482 (-) True G2078119
TU2376118 other upstream 219475 35827116 ~ 35827711 (-) True G2078218
TU2376170 other upstream 251261 35858902 ~ 35863277 (-) False G2078260
TU2376169 other upstream 255112 35862753 ~ 35866253 (-) True G2078260
TU2376173 other upstream 265661 35873302 ~ 35876648 (-) False G2078263

Expression Profile