RNA id: TU2376015



Basic Information


Item Value
RNA id TU2376015
length 219
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G2078124
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35730504 ~ 35730722 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTATTCATTtattatatctgtgtccatattgttcatgagtttctagtagacagaccatatggttcaagagaaaatggCCTAATTAATGACagaagcatctaatcaacaatggcattatttttttaacttttgacttttttcacaactgccactaGTTTGAcaccaaaacattgacaacaaatcCATACATTGCCCCGTGAAAGTCTGCACACCCCTTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2376011 lncRNA downstream 1553 35728640 ~ 35728951 (-) True G2078120
TU2375956 lncRNA downstream 52908 35677284 ~ 35677596 (-) True G2078083
TU2375946 lncRNA downstream 59607 35670666 ~ 35670897 (-) True G2078073
TU2375912 lncRNA downstream 122863 35584795 ~ 35607641 (-) True G2078040
TU2375792 lncRNA downstream 193618 35536165 ~ 35536886 (-) True G2077938
TU2376031 lncRNA upstream 10367 35741089 ~ 35741333 (-) True G2078136
TU2376053 lncRNA upstream 23520 35754242 ~ 35754482 (-) False G2078156
TU2376051 lncRNA upstream 23532 35754254 ~ 35754482 (-) True G2078156
TU2376060 lncRNA upstream 29263 35759985 ~ 35760201 (-) True G2078163
TU2376102 lncRNA upstream 69937 35800659 ~ 35800898 (-) True G2078202
XM_036965804.1 mRNA downstream 399887 35248879 ~ 35330617 (-) False LOC110507210
XM_036965799.1 mRNA downstream 399890 35171163 ~ 35330614 (-) False LOC110507210
XR_002471097.2 mRNA upstream 52771 35783493 ~ 35787697 (-) True LOC110507269
XM_021588406.2 mRNA upstream 345421 36076143 ~ 36107044 (-) True LOC110507979
LOC110507212 mRNA upstream 376994 36107716 ~ 36108445 (-) True LOC110507212
XM_036965427.1 mRNA upstream 402015 36132737 ~ 36262873 (-) False LOC110507213
XM_036965426.1 mRNA upstream 402015 36132737 ~ 36264360 (-) False LOC110507213
TU2376010 other downstream 3022 35726856 ~ 35727482 (-) True G2078119
TU2375789 other downstream 294247 35435594 ~ 35436257 (-) True G2077936
TU2375787 other downstream 295292 35434874 ~ 35435212 (-) True G2077934
TU2375411 other downstream 576461 35116382 ~ 35154043 (-) True G2077617
TU2373899 other downstream 2849616 32878789 ~ 32880888 (-) True G2076236
TU2376118 other upstream 96394 35827116 ~ 35827711 (-) True G2078218
TU2376170 other upstream 128180 35858902 ~ 35863277 (-) False G2078260
TU2376169 other upstream 132031 35862753 ~ 35866253 (-) True G2078260
TU2376173 other upstream 142580 35873302 ~ 35876648 (-) False G2078263
TU2376174 other upstream 143702 35874424 ~ 35876648 (-) True G2078263

Expression Profile