RNA id: TU2376169


Basic Information

Item Value
RNA id TU2376169
length 492
RNA type TUCP
GC content 0.44
exon number 3
gene id G2078260
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35858902 ~ 35866253 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gagaaggacatcctcatggttactgagaatgacatcctcatggttactgagaaggacatcctaatggttactgagaaggacatcctaatggccctggatactgacatggttactgagaaggacatcctaatggttactgagaaggacatcctaatggttactgagaaggatatcctcatggttactgagaaggacatcctaatggttactcaGAAGGACATCCttatggttactgaggaggacatcctaatggttactgagaatgacatcctcatggttactgagaaggacatcctaatgaccctggatactgacatggttactgagaaggacatcctaatggttactgagaaggacatcctaatggttactgagaaggacatcctaatgtccctgaatactgacatggttactgagaaggacatcctaatggttactgaggaggacatcctaatgtccctggatactgacatggttactgagaaggacatc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2376142 lncRNA downstream 7518 35841508 ~ 35855235 (-) True G2078241
TU2376144 lncRNA downstream 11801 35845233 ~ 35850952 (-) False G2078242
TU2376148 lncRNA downstream 11801 35845233 ~ 35850952 (-) False G2078242
TU2376145 lncRNA downstream 11801 35849262 ~ 35850952 (-) False G2078242
TU2376147 lncRNA downstream 11801 35849262 ~ 35850952 (-) True G2078242
TU2376194 lncRNA upstream 51705 35917958 ~ 35918167 (-) True G2078283
TU2376233 lncRNA upstream 84046 35950299 ~ 35950505 (-) True G2078322
TU2376235 lncRNA upstream 89816 35956069 ~ 35956304 (-) True G2078324
TU2376236 lncRNA upstream 90172 35956425 ~ 35956678 (-) True G2078325
TU2376284 lncRNA upstream 118784 35985037 ~ 35985358 (-) True G2078361
XR_002471097.2 mRNA downstream 75056 35783493 ~ 35787697 (-) True LOC110507269
XM_036965804.1 mRNA downstream 532136 35248879 ~ 35330617 (-) False LOC110507210
XM_036965800.1 mRNA downstream 532139 35171221 ~ 35330614 (-) False LOC110507210
XM_021588406.2 mRNA upstream 209890 36076143 ~ 36107044 (-) True LOC110507979
LOC110507212 mRNA upstream 241463 36107716 ~ 36108445 (-) True LOC110507212
XM_036965427.1 mRNA upstream 266484 36132737 ~ 36262873 (-) False LOC110507213
XM_036965426.1 mRNA upstream 266484 36132737 ~ 36264360 (-) False LOC110507213
XM_036965288.1 mRNA upstream 428797 36295050 ~ 36364517 (-) False LOC110508009
TU2376118 other downstream 35042 35827116 ~ 35827711 (-) True G2078218
TU2376010 other downstream 135271 35726856 ~ 35727482 (-) True G2078119
TU2375789 other downstream 426496 35435594 ~ 35436257 (-) True G2077936
TU2375787 other downstream 427541 35434874 ~ 35435212 (-) True G2077934
TU2375411 other downstream 708710 35116382 ~ 35154043 (-) True G2077617
TU2376173 other upstream 7049 35873302 ~ 35876648 (-) False G2078263
TU2376174 other upstream 8171 35874424 ~ 35876648 (-) True G2078263
TU2376644 other upstream 236447 36102700 ~ 36104141 (-) True G2078637
TU2376662 other upstream 388343 36254596 ~ 36264270 (-) True LOC110507213
TU2376791 other upstream 516932 36383185 ~ 36389384 (-) True G2078753

Expression Profile