Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00055225 |
| length | 810 |
| RNA type | processed_transcript |
| GC content | 0.46 |
| exon number | 3 |
| gene id | XLOC_028452 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 4540223 ~ 4592287 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042981 | regulation of apoptotic process | biological_process |
| GO:0007165 | signal transduction | biological_process |
| id | description |
|---|---|
| ZDB-GENE-100422-9 | Predicted to be involved in signal transduction. Predicted to act upstream of or within regulation of apoptotic process. Predicted to be active in cytoplasm. Orthologous to human RASSF3 (Ras association domain family member 3). |
| ensembl_id | ENSDART00000153535 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00055221 | lncRNA | downstream | 29701 | 4514438 ~ 4516508 (-) | True | XLOC_028450 |
| TCONS_00055216 | lncRNA | downstream | 171505 | 4321168 ~ 4374704 (-) | True | XLOC_028446 |
| TCONS_00055214 | lncRNA | downstream | 289934 | 4238000 ~ 4256275 (-) | False | XLOC_028445 |
| TCONS_00055208 | lncRNA | downstream | 317054 | 4224273 ~ 4229155 (-) | True | XLOC_028443 |
| TCONS_00058004 | lncRNA | downstream | 317141 | 4213655 ~ 4229068 (-) | False | XLOC_028443 |
| TCONS_00058006 | lncRNA | upstream | 369662 | 4940467 ~ 4962892 (-) | False | XLOC_028461 |
| TCONS_00057318 | lncRNA | upstream | 385147 | 4955952 ~ 4961841 (-) | True | XLOC_028461 |
| TCONS_00058009 | lncRNA | upstream | 392152 | 4962957 ~ 4966824 (-) | False | XLOC_028462 |
| TCONS_00058011 | lncRNA | upstream | 392152 | 4962957 ~ 4966824 (-) | False | XLOC_028462 |
| TCONS_00058013 | lncRNA | upstream | 392152 | 4962957 ~ 4966824 (-) | False | XLOC_028462 |
| TCONS_00055222 | mRNA | downstream | 11020 | 4526248 ~ 4535189 (-) | True | XLOC_028451 |
| TCONS_00055219 | mRNA | downstream | 38448 | 4484651 ~ 4507761 (-) | False | XLOC_028449 |
| TCONS_00055218 | mRNA | downstream | 114234 | 4397503 ~ 4431975 (-) | True | XLOC_028448 |
| TCONS_00055217 | mRNA | downstream | 159197 | 4376498 ~ 4387012 (-) | True | XLOC_028447 |
| TCONS_00055215 | mRNA | downstream | 284536 | 4240262 ~ 4261673 (-) | True | XLOC_028445 |
| TCONS_00055226 | mRNA | upstream | 31010 | 4601815 ~ 4612116 (-) | True | XLOC_028453 |
| TCONS_00055227 | mRNA | upstream | 55989 | 4626794 ~ 4706893 (-) | True | XLOC_028454 |
| TCONS_00055229 | mRNA | upstream | 141605 | 4712410 ~ 4751983 (-) | False | XLOC_028455 |
| TCONS_00055228 | mRNA | upstream | 141605 | 4712410 ~ 4751983 (-) | False | XLOC_028455 |
| TCONS_00055230 | mRNA | upstream | 180858 | 4751663 ~ 4751981 (-) | True | XLOC_028455 |
| TCONS_00055220 | other | downstream | 49418 | 4492566 ~ 4496791 (-) | True | XLOC_028449 |
| TCONS_00055185 | other | downstream | 1860119 | 2675106 ~ 2686090 (-) | False | XLOC_028423 |
| TCONS_00055166 | other | downstream | 2383485 | 2060524 ~ 2162724 (-) | False | XLOC_028412 |
| TCONS_00055131 | other | downstream | 3597367 | 937229 ~ 948842 (-) | True | XLOC_028386 |
| TCONS_00055123 | other | downstream | 3737756 | 804147 ~ 808453 (-) | True | XLOC_028380 |
| TCONS_00055239 | other | upstream | 359606 | 4930411 ~ 4932524 (-) | True | XLOC_028460 |
| TCONS_00055263 | other | upstream | 799251 | 5370056 ~ 5371622 (-) | True | XLOC_028470 |
| TCONS_00055293 | other | upstream | 1865959 | 6436764 ~ 6451732 (-) | False | XLOC_028490 |
| TCONS_00055295 | other | upstream | 1994848 | 6565653 ~ 6567266 (-) | True | XLOC_028490 |
| TCONS_00055299 | other | upstream | 2614390 | 7185195 ~ 7185311 (-) | True | XLOC_028494 |
