RNA id: TU2384041



Basic Information


Item Value
RNA id TU2384041
length 383
lncRNA type intronic
GC content 0.42
exon number 2
gene id G2084818
representative False

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 42958980 ~ 42964591 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tagatgaacatacggaacactaacacactagatgaacatacggaacaccaCCACACTAGATGAACATAAGGAACAccaCCACACTAGATGAACATAAGGAACAccaacacactagatgaacacacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaacactaacacactagatgaacatacggaacaccaacacactagatgaacatacggaacaccaccacactagatgaacatacggaacactaacacactagatgaacatacggaaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2384017 lncRNA downstream 16515 42933657 ~ 42942465 (-) False G2084808
TU2384021 lncRNA downstream 16515 42933657 ~ 42942465 (-) False G2084808
TU2384023 lncRNA downstream 16515 42933657 ~ 42942465 (-) True G2084808
TU2383996 lncRNA downstream 40426 42916704 ~ 42918554 (-) True G2084798
TU2383982 lncRNA downstream 68569 42888049 ~ 42890411 (-) True G2084787
TU2384040 lncRNA upstream 1235 42962106 ~ 42964591 (-) False G2084818
TU2384042 lncRNA upstream 1235 42962106 ~ 42964591 (-) False G2084818
TU2384035 lncRNA upstream 2071 42962942 ~ 42964591 (-) True G2084818
TU2384093 lncRNA upstream 58564 43019435 ~ 43019880 (-) False G2084849
TU2384094 lncRNA upstream 58700 43019571 ~ 43019880 (-) True G2084849
XM_036965667.1 mRNA downstream 309079 42647144 ~ 42649901 (-) False LOC118944772
XM_021588507.2 mRNA downstream 394400 42561570 ~ 42564580 (-) True LOC110508058
XM_036965653.1 mRNA downstream 418640 42516527 ~ 42540340 (-) False neu4
XM_036965261.1 mRNA downstream 673435 42262030 ~ 42285545 (-) True aadac
XR_005040014.1 mRNA downstream 851816 41938036 ~ 42107164 (-) False LOC110508063
XM_036965644.1 mRNA upstream 334940 43295811 ~ 43529347 (-) False LOC110519585
XM_036965645.1 mRNA upstream 334940 43295811 ~ 43529347 (-) False LOC110519585
LOC110508094 mRNA upstream 574684 43535555 ~ 43549204 (-) True LOC110508094
XM_036965671.1 mRNA upstream 595705 43556576 ~ 43558533 (-) False tmem97
XM_021588535.2 mRNA upstream 595746 43556617 ~ 43558533 (-) True tmem97
TU2383921 other downstream 173945 42784627 ~ 42785035 (-) True G2084740
TU2382643 other downstream 1278288 41676251 ~ 41680692 (-) True LOC118944786
TU2382642 other downstream 1278340 41676251 ~ 41680640 (-) False LOC118944786
TU2382641 other downstream 1278446 41676251 ~ 41680534 (-) False LOC118944786
TU2382371 other downstream 1534940 41423539 ~ 41424040 (-) True G2083443
TU2385185 other upstream 951289 43912160 ~ 43912680 (-) True G2085726
TU2386614 other upstream 1960038 44920909 ~ 44921312 (-) True G2086783
TU2386975 other upstream 2569485 45530356 ~ 45530780 (-) True G2087090
TU2387219 other upstream 2836199 45797070 ~ 45798330 (-) True G2087288
TU2388664 other upstream 4011710 46972581 ~ 46975108 (-) True ndufc2

Expression Profile