RNA id: TU2387032


Basic Information

Item Value
RNA id TU2387032
length 1368
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G2087132
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 45665060 ~ 45666903 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGTTGTAGTAAATCCTCTATGTAAAGCAGTTCAACATGATTCTCCTAGTTATTGTAAATCCTCTATGTAAAGCAGTTCAACATGATTCTCTGGGTTGTTGTAAATCCTCTATGTAAAGCAGTTCAACATGATTCTCTGGGTTGTTGTAAATCCTATATGTAAAGCAGTTCAACATGATTCTCTGGGTTGTTGTAAATCCTCTATGTAAAGCAGTTCAACATGATTCTCTGGGTTGTTGTAAATCCTCTATGTAAAGAAGTTCAACATGATTATCTGGGTTGTTGTAAATCCTCTATGTAAAGCAGTTCAACATGATTCTCTGGGTTGTTGTAAATCCTCTATGTAAAGCAGTTCAACATGATTCTCTGGGTTGTTGTAAATCCTCTATGTAAAGCAGTTCAACATGATTATCTGGGTTGTTGTAAATCTTCTATGTAAAGCAGTTCAACATGATTCTCTGGGTTGTTGTAAATCCTCTATGTAAACAGGAAAGACGAGGCGAAATGAGAGTAGAGGCGTGGTAGTCTGAAGTCAGATGGGGAGGATTGTAGAGAGGCAGTCTGACATGGTCCAATACAGGCAGAAGACTGTCCTACGTAAAGTACATCCCAACTGTGAATTTAACTCTAAAGTAAAGTACTACACAGTACTACAGTCTATGGACCCTAAAGTACTGCACAGTACTACTGTCTATGGACCCTAAAGTACTACTGTCTATGGACCCTAAAGTACTGCACAGTACTACTGTCTATGTACCCTAAAGTACTGCACAGTACTACTGTCTGTGGACCCTAACGTACTGCACAGTACTACTGTCTATGGACCCTAACGTACTACTGTCTATGGACCCTAAAGTACTGCACAGTACTACTGTCTATGGACCCTAAAGTACTACACAGTACTACTGTCTATGGACCCTAACGTACTACTGTCTATGGACCCTAAAGTACTACACAGTACTACTGTCTATGGACCATAAAGTACTACTGTCTATGGACCCTAAAGTACTGCACAATACTACTGTCTATGGACCCTAAAGTACTGCACAATACTACTGTCTATGGACCCTAAAGTACTACATAGTACTACTGTCTATGGACCCTAAAGTACTGCACAGCCCTACAGTGACCCTCAACTACAGTACTGAACGGATGCCTTGACGATCCCAGTCTTTCCAGGACAGCATCGGTGTTATGTCAGTAAATTGTGTGTCCAACATTGATCCGCCATGTGGCTCAGTAGCAGTCTAGGGCTAACTGGATTAAATGGGGTCGTCAGGACTTCATGATCTTATCCAGTGTGTAGAATTTCAGTGCTGCTTACTTATACACTGTAACTATTCATATGCGGTGCAACATGTAGCCTAGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2387001 lncRNA downstream 36837 45627990 ~ 45628223 (-) True G2087116
TU2386996 lncRNA downstream 47959 45616892 ~ 45617101 (-) True G2087111
TU2386992 lncRNA downstream 64350 45600498 ~ 45600710 (-) True G2087107
TU2386991 lncRNA downstream 65513 45599124 ~ 45599547 (-) True G2087106
TU2386988 lncRNA downstream 71986 45592843 ~ 45593074 (-) True G2087103
TU2387042 lncRNA upstream 15261 45682164 ~ 45682987 (-) False G2087140
TU2387041 lncRNA upstream 15628 45682531 ~ 45682987 (-) True G2087140
TU2387162 lncRNA upstream 35339 45702242 ~ 45702473 (-) True G2087233
TU2387163 lncRNA upstream 38086 45704989 ~ 45706444 (-) True G2087234
TU2387182 lncRNA upstream 67007 45733910 ~ 45734395 (-) True G2087253
XM_036965246.1 mRNA downstream 222287 45435721 ~ 45442773 (-) True rwdd2b
XM_036964774.1 mRNA downstream 943418 44362319 ~ 44721642 (-) True gbe1b
XM_036964827.1 mRNA downstream 1355044 44262965 ~ 44310016 (-) False LOC110507241
XM_036965046.1 mRNA upstream 6598 45673501 ~ 45686113 (-) True stoml3a
XM_036965517.1 mRNA upstream 21051 45687954 ~ 45701583 (-) False slc25a15a
XM_036965518.1 mRNA upstream 21051 45687954 ~ 45701583 (-) False slc25a15a
XM_036965519.1 mRNA upstream 21051 45687954 ~ 45701584 (-) False slc25a15a
XM_036965520.1 mRNA upstream 21051 45687954 ~ 45701584 (-) True slc25a15a
TU2386975 other downstream 134280 45530356 ~ 45530780 (-) True G2087090
TU2386614 other downstream 743748 44920909 ~ 44921312 (-) True G2086783
TU2385185 other downstream 1752380 43912160 ~ 43912680 (-) True G2085726
TU2383921 other downstream 2880025 42784627 ~ 42785035 (-) True G2084740
TU2382643 other downstream 3984368 41676251 ~ 41680692 (-) True LOC118944786
TU2387219 other upstream 130167 45797070 ~ 45798330 (-) True G2087288
TU2388664 other upstream 1305678 46972581 ~ 46975108 (-) True ndufc2
TU2388685 other upstream 1336962 47003865 ~ 47004875 (-) True G2088345
TU2388939 other upstream 1585772 47252675 ~ 47253186 (-) True G2088531
TU2389178 other upstream 1877400 47544303 ~ 47550500 (-) True G2088739

Expression Profile