Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00055309 |
| length | 1396 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 10 |
| gene id | XLOC_028507 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 7870384 ~ 7876005 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006753 | nucleoside phosphate metabolic process | biological_process |
| GO:0019693 | ribose phosphate metabolic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0047631 | ADP-ribose diphosphatase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| ko00230 | Purine metabolism |
| id | description |
|---|---|
| ZDB-GENE-040625-63 | Predicted to enable ADP-ribose diphosphatase activity. Predicted to be involved in nucleoside phosphate metabolic process and ribose phosphate metabolic process. Predicted to be active in nucleus. Orthologous to human NUDT5 (nudix hydrolase 5). |
| ensembl_id | ENSDART00000109252 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00055305 | lncRNA | downstream | 197261 | 7666715 ~ 7673123 (-) | True | XLOC_028503 |
| TCONS_00058060 | lncRNA | downstream | 217216 | 7650010 ~ 7653168 (-) | True | XLOC_028501 |
| TCONS_00058058 | lncRNA | downstream | 217386 | 7640406 ~ 7652998 (-) | False | XLOC_028501 |
| TCONS_00058061 | lncRNA | upstream | 95677 | 7971682 ~ 7973335 (-) | True | XLOC_028508 |
| TCONS_00058062 | lncRNA | upstream | 337165 | 8213170 ~ 8214435 (-) | True | XLOC_028516 |
| TCONS_00057326 | lncRNA | upstream | 343456 | 8219461 ~ 8219991 (-) | True | XLOC_028517 |
| TCONS_00055330 | lncRNA | upstream | 758699 | 8634704 ~ 8638629 (-) | True | XLOC_028520 |
| TCONS_00055331 | lncRNA | upstream | 833077 | 8709082 ~ 8735591 (-) | True | XLOC_028521 |
| TCONS_00055308 | mRNA | downstream | 653 | 7851129 ~ 7869731 (-) | True | XLOC_028506 |
| TCONS_00055307 | mRNA | downstream | 58459 | 7718854 ~ 7811925 (-) | True | XLOC_028505 |
| TCONS_00055304 | mRNA | downstream | 197219 | 7653607 ~ 7673165 (-) | False | XLOC_028503 |
| TCONS_00055302 | mRNA | downstream | 638904 | 7229236 ~ 7231480 (-) | True | XLOC_028497 |
| TCONS_00055300 | mRNA | downstream | 657509 | 7210755 ~ 7212875 (-) | True | XLOC_028495 |
| TCONS_00055315 | mRNA | upstream | 125869 | 8001874 ~ 8014463 (-) | True | XLOC_028509 |
| TCONS_00055316 | mRNA | upstream | 153963 | 8029968 ~ 8030583 (-) | True | XLOC_028510 |
| TCONS_00055317 | mRNA | upstream | 158376 | 8034381 ~ 8035520 (-) | True | XLOC_028511 |
| TCONS_00055318 | mRNA | upstream | 163786 | 8039791 ~ 8040436 (-) | True | XLOC_028512 |
| TCONS_00055319 | mRNA | upstream | 166800 | 8042805 ~ 8043964 (-) | False | XLOC_028513 |
| TCONS_00055306 | other | downstream | 190289 | 7679979 ~ 7680095 (-) | True | XLOC_028504 |
| TCONS_00055301 | other | downstream | 648017 | 7222080 ~ 7222367 (-) | True | XLOC_028496 |
| TCONS_00055299 | other | downstream | 685073 | 7185195 ~ 7185311 (-) | True | XLOC_028494 |
| TCONS_00055295 | other | downstream | 1303118 | 6565653 ~ 6567266 (-) | True | XLOC_028490 |
| TCONS_00055293 | other | downstream | 1418652 | 6436764 ~ 6451732 (-) | False | XLOC_028490 |
| TCONS_00055327 | other | upstream | 265344 | 8141349 ~ 8141466 (-) | True | XLOC_028515 |
| TCONS_00055328 | other | upstream | 711782 | 8587787 ~ 8587908 (-) | True | XLOC_028518 |
| TCONS_00055389 | other | upstream | 2785556 | 10661561 ~ 10661677 (-) | True | XLOC_028553 |
| TCONS_00055432 | other | upstream | 3730753 | 11606758 ~ 11606855 (-) | True | XLOC_028574 |
| TCONS_00055433 | other | upstream | 3732191 | 11608196 ~ 11608283 (-) | True | XLOC_028575 |
