Item | Value |
---|---|
RNA id | TCONS_00055311 |
length | 802 |
RNA type | nonsense_mediated_decay |
GC content | 0.43 |
exon number | 8 |
gene id | XLOC_028507 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007115.7 |
NCBI id | CM002888.2 |
chromosome length | 78093715 |
location | 7870384 ~ 7876005 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006753 | nucleoside phosphate metabolic process | biological_process |
GO:0019693 | ribose phosphate metabolic process | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0047631 | ADP-ribose diphosphatase activity | molecular_function |
GO:0016787 | hydrolase activity | molecular_function |
id | description |
---|---|
ko00230 | Purine metabolism |
id | description |
---|---|
ZDB-GENE-040625-63 | Predicted to enable ADP-ribose diphosphatase activity. Predicted to be involved in nucleoside phosphate metabolic process and ribose phosphate metabolic process. Predicted to be active in nucleus. Orthologous to human NUDT5 (nudix hydrolase 5). |
ensembl_id | ENSDART00000160915 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00055305 | lncRNA | downstream | 197613 | 7666715 ~ 7673123 (-) | True | XLOC_028503 |
TCONS_00058060 | lncRNA | downstream | 217568 | 7650010 ~ 7653168 (-) | True | XLOC_028501 |
TCONS_00058058 | lncRNA | downstream | 217738 | 7640406 ~ 7652998 (-) | False | XLOC_028501 |
TCONS_00058061 | lncRNA | upstream | 95922 | 7971682 ~ 7973335 (-) | True | XLOC_028508 |
TCONS_00058062 | lncRNA | upstream | 337410 | 8213170 ~ 8214435 (-) | True | XLOC_028516 |
TCONS_00057326 | lncRNA | upstream | 343701 | 8219461 ~ 8219991 (-) | True | XLOC_028517 |
TCONS_00055330 | lncRNA | upstream | 758944 | 8634704 ~ 8638629 (-) | True | XLOC_028520 |
TCONS_00055331 | lncRNA | upstream | 833322 | 8709082 ~ 8735591 (-) | True | XLOC_028521 |
TCONS_00055308 | mRNA | downstream | 1005 | 7851129 ~ 7869731 (-) | True | XLOC_028506 |
TCONS_00055307 | mRNA | downstream | 58811 | 7718854 ~ 7811925 (-) | True | XLOC_028505 |
TCONS_00055304 | mRNA | downstream | 197571 | 7653607 ~ 7673165 (-) | False | XLOC_028503 |
TCONS_00055302 | mRNA | downstream | 639256 | 7229236 ~ 7231480 (-) | True | XLOC_028497 |
TCONS_00055300 | mRNA | downstream | 657861 | 7210755 ~ 7212875 (-) | True | XLOC_028495 |
TCONS_00055315 | mRNA | upstream | 126114 | 8001874 ~ 8014463 (-) | True | XLOC_028509 |
TCONS_00055316 | mRNA | upstream | 154208 | 8029968 ~ 8030583 (-) | True | XLOC_028510 |
TCONS_00055317 | mRNA | upstream | 158621 | 8034381 ~ 8035520 (-) | True | XLOC_028511 |
TCONS_00055318 | mRNA | upstream | 164031 | 8039791 ~ 8040436 (-) | True | XLOC_028512 |
TCONS_00055319 | mRNA | upstream | 167045 | 8042805 ~ 8043964 (-) | False | XLOC_028513 |
TCONS_00055306 | other | downstream | 190641 | 7679979 ~ 7680095 (-) | True | XLOC_028504 |
TCONS_00055301 | other | downstream | 648369 | 7222080 ~ 7222367 (-) | True | XLOC_028496 |
TCONS_00055299 | other | downstream | 685425 | 7185195 ~ 7185311 (-) | True | XLOC_028494 |
TCONS_00055295 | other | downstream | 1303470 | 6565653 ~ 6567266 (-) | True | XLOC_028490 |
TCONS_00055293 | other | downstream | 1419004 | 6436764 ~ 6451732 (-) | False | XLOC_028490 |
TCONS_00055327 | other | upstream | 265589 | 8141349 ~ 8141466 (-) | True | XLOC_028515 |
TCONS_00055328 | other | upstream | 712027 | 8587787 ~ 8587908 (-) | True | XLOC_028518 |
TCONS_00055389 | other | upstream | 2785801 | 10661561 ~ 10661677 (-) | True | XLOC_028553 |
TCONS_00055432 | other | upstream | 3730998 | 11606758 ~ 11606855 (-) | True | XLOC_028574 |
TCONS_00055433 | other | upstream | 3732436 | 11608196 ~ 11608283 (-) | True | XLOC_028575 |