Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00055323 |
| length | 660 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 3 |
| gene id | XLOC_028514 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 8045564 ~ 8155571 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0032414 | positive regulation of ion transmembrane transporter activity | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0010766 | negative regulation of sodium ion transport | biological_process |
| GO:1903288 | positive regulation of potassium ion import across plasma membrane | biological_process |
| GO:0048919 | posterior lateral line neuromast development | biological_process |
| GO:0050801 | ion homeostasis | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:2000651 | positive regulation of sodium ion transmembrane transporter activity | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0019869 | chloride channel inhibitor activity | molecular_function |
| GO:0019870 | potassium channel inhibitor activity | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-2656 | Predicted to enable chloride channel inhibitor activity; potassium channel inhibitor activity; and protein serine/threonine kinase activity. Acts upstream of or within angiogenesis and posterior lateral line neuromast development. Predicted to be active in cytosol. Is expressed in several structures, including midbrain neural keel; midbrain neural rod; notochord; posterior lateral line neuromast; and trunk. Human ortholog(s) of this gene implicated in hereditary sensory and autonomic neuropathy type 2A; hereditary sensory neuropathy; hypertension; and pseudohypoaldosteronism. Orthologous to human WNK1 (WNK lysine deficient protein kinase 1). |
| ensembl_id | ENSDART00000132228 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00058061 | lncRNA | downstream | 75529 | 7971682 ~ 7973335 (-) | True | XLOC_028508 |
| TCONS_00055314 | lncRNA | downstream | 173313 | 7872321 ~ 7875551 (-) | True | XLOC_028507 |
| TCONS_00055305 | lncRNA | downstream | 375741 | 7666715 ~ 7673123 (-) | True | XLOC_028503 |
| TCONS_00058060 | lncRNA | downstream | 395696 | 7650010 ~ 7653168 (-) | True | XLOC_028501 |
| TCONS_00055303 | lncRNA | downstream | 395883 | 7650003 ~ 7652981 (-) | False | XLOC_028501 |
| TCONS_00058062 | lncRNA | upstream | 154956 | 8213170 ~ 8214435 (-) | True | XLOC_028516 |
| TCONS_00057326 | lncRNA | upstream | 161247 | 8219461 ~ 8219991 (-) | True | XLOC_028517 |
| TCONS_00055330 | lncRNA | upstream | 576490 | 8634704 ~ 8638629 (-) | True | XLOC_028520 |
| TCONS_00055331 | lncRNA | upstream | 650868 | 8709082 ~ 8735591 (-) | True | XLOC_028521 |
| TCONS_00058063 | lncRNA | upstream | 846077 | 8904291 ~ 8905453 (-) | True | XLOC_028525 |
| TCONS_00055319 | mRNA | downstream | 4900 | 8042805 ~ 8043964 (-) | False | XLOC_028513 |
| TCONS_00055320 | mRNA | downstream | 5025 | 8043377 ~ 8043839 (-) | True | XLOC_028513 |
| TCONS_00055318 | mRNA | downstream | 8428 | 8039791 ~ 8040436 (-) | True | XLOC_028512 |
| TCONS_00055317 | mRNA | downstream | 13344 | 8034381 ~ 8035520 (-) | True | XLOC_028511 |
| TCONS_00055316 | mRNA | downstream | 18281 | 8029968 ~ 8030583 (-) | True | XLOC_028510 |
| TCONS_00055326 | mRNA | upstream | 29490 | 8087704 ~ 8093753 (-) | True | XLOC_028514 |
| TCONS_00055329 | mRNA | upstream | 551303 | 8609517 ~ 8611841 (-) | True | XLOC_028519 |
| TCONS_00055332 | mRNA | upstream | 680879 | 8739093 ~ 8779141 (-) | False | XLOC_028522 |
| TCONS_00055333 | mRNA | upstream | 685341 | 8743555 ~ 8779189 (-) | True | XLOC_028522 |
| TCONS_00055334 | mRNA | upstream | 721965 | 8780179 ~ 8795250 (-) | True | XLOC_028523 |
| TCONS_00055310 | other | downstream | 172920 | 7870665 ~ 7875944 (-) | False | XLOC_028507 |
| TCONS_00055313 | other | downstream | 172934 | 7870895 ~ 7875930 (-) | False | XLOC_028507 |
| TCONS_00055311 | other | downstream | 173104 | 7870736 ~ 7875760 (-) | False | XLOC_028507 |
| TCONS_00055306 | other | downstream | 368769 | 7679979 ~ 7680095 (-) | True | XLOC_028504 |
| TCONS_00055301 | other | downstream | 826497 | 7222080 ~ 7222367 (-) | True | XLOC_028496 |
| TCONS_00055327 | other | upstream | 83135 | 8141349 ~ 8141466 (-) | True | XLOC_028515 |
| TCONS_00055328 | other | upstream | 529573 | 8587787 ~ 8587908 (-) | True | XLOC_028518 |
| TCONS_00055389 | other | upstream | 2603347 | 10661561 ~ 10661677 (-) | True | XLOC_028553 |
| TCONS_00055432 | other | upstream | 3548544 | 11606758 ~ 11606855 (-) | True | XLOC_028574 |
| TCONS_00055433 | other | upstream | 3549982 | 11608196 ~ 11608283 (-) | True | XLOC_028575 |
