Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2405580 |
| length | 647 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | LOC118944863 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 10058349 ~ 10060043 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2405562 | lncRNA | downstream | 35709 | 10022298 ~ 10022640 (-) | True | G2103153 |
| TU2405557 | lncRNA | downstream | 40406 | 10017727 ~ 10017943 (-) | True | G2103148 |
| TU2405532 | lncRNA | downstream | 84234 | 9969061 ~ 9974115 (-) | False | G2103127 |
| TU2405639 | lncRNA | upstream | 115969 | 10175929 ~ 10176164 (-) | True | G2103229 |
| TU2405641 | lncRNA | upstream | 123948 | 10183908 ~ 10184116 (-) | True | G2103231 |
| TU2405643 | lncRNA | upstream | 126031 | 10185991 ~ 10186191 (-) | True | G2103233 |
| TU2405644 | lncRNA | upstream | 127548 | 10187508 ~ 10187723 (-) | True | G2103234 |
| TU2405647 | lncRNA | upstream | 130678 | 10190638 ~ 10190863 (-) | True | G2103237 |
| XM_021589019.2 | mRNA | downstream | 17318 | 10030793 ~ 10041031 (-) | True | LOC110508478 |
| XM_021589018.2 | mRNA | downstream | 17319 | 10030793 ~ 10041030 (-) | False | LOC110508478 |
| XM_021589014.2 | mRNA | downstream | 50420 | 10004226 ~ 10007929 (-) | False | LOC110508476 |
| LOC110508158 | mRNA | downstream | 117844 | 9938973 ~ 9940505 (-) | True | LOC110508158 |
| LOC110508157 | mRNA | downstream | 121036 | 9897773 ~ 9937313 (-) | True | LOC110508157 |
| XM_021589020.2 | mRNA | upstream | 8906 | 10068866 ~ 10076428 (-) | True | dhrs1 |
| XM_021589022.2 | mRNA | upstream | 93016 | 10152976 ~ 10174843 (-) | True | mmp14b |
| XM_021589023.2 | mRNA | upstream | 118436 | 10178396 ~ 10195465 (-) | True | LOC110508484 |
| XR_002471318.2 | mRNA | upstream | 177395 | 10237355 ~ 10244790 (-) | True | LOC110508487 |
| XM_021589036.2 | mRNA | upstream | 232051 | 10292011 ~ 10301313 (-) | False | LOC110508490 |
| TU2405551 | other | downstream | 50446 | 10004226 ~ 10007903 (-) | True | LOC110508476 |
| TU2405361 | other | downstream | 246491 | 9796494 ~ 9811858 (-) | True | LOC110508473 |
| TU2405415 | other | downstream | 281441 | 9776619 ~ 9776908 (-) | True | G2103015 |
| TU2405308 | other | downstream | 489298 | 9567966 ~ 9569051 (-) | True | G2102910 |
| TU2405103 | other | downstream | 803183 | 9231694 ~ 9255166 (-) | False | G2102731 |
| TU2405613 | other | upstream | 53468 | 10113428 ~ 10115397 (-) | True | G2103203 |
| TU2405667 | other | upstream | 146103 | 10206063 ~ 10206676 (-) | True | G2103257 |
| TU2406439 | other | upstream | 648052 | 10708012 ~ 10708499 (-) | True | G2103920 |
| TU2406504 | other | upstream | 826238 | 10886198 ~ 10894080 (-) | True | LOC110508522 |
| TU2408125 | other | upstream | 1439166 | 11499126 ~ 11500072 (-) | True | G2105419 |
