Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00055390 |
| length | 1376 |
| lncRNA type | antisense |
| GC content | 0.37 |
| exon number | 7 |
| gene id | XLOC_028554 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 10748977 ~ 10752941 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0072659 | protein localization to plasma membrane | biological_process |
| GO:0043001 | Golgi to plasma membrane protein transport | biological_process |
| GO:0006750 | glutathione biosynthetic process | biological_process |
| GO:1990778 | protein localization to cell periphery | biological_process |
| GO:0090150 | establishment of protein localization to membrane | biological_process |
| GO:0019184 | nonribosomal peptide biosynthetic process | biological_process |
| GO:0017109 | glutamate-cysteine ligase complex | cellular_component |
| ensembl_id | ENSDART00000141383 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00057327 | lncRNA | downstream | 400908 | 10346738 ~ 10348612 (-) | True | XLOC_028551 |
| TCONS_00058069 | lncRNA | downstream | 840149 | 9906081 ~ 9909371 (-) | False | XLOC_028550 |
| TCONS_00055387 | lncRNA | downstream | 840149 | 9907869 ~ 9909371 (-) | True | XLOC_028550 |
| TCONS_00055377 | lncRNA | downstream | 927001 | 9819357 ~ 9822519 (-) | True | XLOC_028546 |
| TCONS_00055375 | lncRNA | downstream | 947873 | 9798053 ~ 9801647 (-) | True | XLOC_028545 |
| TCONS_00058076 | lncRNA | upstream | 13702 | 10766014 ~ 10769504 (-) | False | XLOC_028555 |
| TCONS_00058077 | lncRNA | upstream | 13702 | 10766014 ~ 10769736 (-) | False | XLOC_028555 |
| TCONS_00058078 | lncRNA | upstream | 13702 | 10766014 ~ 10769864 (-) | False | XLOC_028555 |
| TCONS_00058079 | lncRNA | upstream | 13702 | 10766014 ~ 10789020 (-) | False | XLOC_028555 |
| TCONS_00058080 | lncRNA | upstream | 13702 | 10766014 ~ 10789207 (-) | False | XLOC_028555 |
| TCONS_00055388 | mRNA | downstream | 150458 | 10574822 ~ 10599062 (-) | True | XLOC_028552 |
| TCONS_00055386 | mRNA | downstream | 840149 | 9901116 ~ 9909371 (-) | False | XLOC_028550 |
| TCONS_00055385 | mRNA | downstream | 857646 | 9880647 ~ 9891874 (-) | True | XLOC_028549 |
| TCONS_00055383 | mRNA | downstream | 881735 | 9854075 ~ 9867785 (-) | False | XLOC_028548 |
| TCONS_00055398 | mRNA | upstream | 59178 | 10811490 ~ 10826575 (-) | False | XLOC_028555 |
| TCONS_00055399 | mRNA | upstream | 60949 | 10813261 ~ 10835620 (-) | False | XLOC_028555 |
| TCONS_00055400 | mRNA | upstream | 61598 | 10813910 ~ 10826575 (-) | True | XLOC_028555 |
| TCONS_00055401 | mRNA | upstream | 173859 | 10926171 ~ 10931729 (-) | True | XLOC_028557 |
| TCONS_00055402 | mRNA | upstream | 197077 | 10949389 ~ 10958074 (-) | True | XLOC_028558 |
| TCONS_00055389 | other | downstream | 87843 | 10661561 ~ 10661677 (-) | True | XLOC_028553 |
| TCONS_00055328 | other | downstream | 2161612 | 8587787 ~ 8587908 (-) | True | XLOC_028518 |
| TCONS_00055327 | other | downstream | 2608054 | 8141349 ~ 8141466 (-) | True | XLOC_028515 |
| TCONS_00055313 | other | downstream | 2873590 | 7870895 ~ 7875930 (-) | False | XLOC_028507 |
| TCONS_00055311 | other | downstream | 2873760 | 7870736 ~ 7875760 (-) | False | XLOC_028507 |
| TCONS_00055432 | other | upstream | 854446 | 11606758 ~ 11606855 (-) | True | XLOC_028574 |
| TCONS_00055433 | other | upstream | 855884 | 11608196 ~ 11608283 (-) | True | XLOC_028575 |
| TCONS_00055457 | other | upstream | 1522802 | 12275114 ~ 12286066 (-) | True | XLOC_028592 |
| TCONS_00055464 | other | upstream | 1661107 | 12413419 ~ 12433016 (-) | True | XLOC_028596 |
| TCONS_00055465 | other | upstream | 1843368 | 12595680 ~ 12595804 (-) | True | XLOC_028597 |
