Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021588613.2 |
| length | 1117 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 8 |
| gene id | LOC110508177 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 19029299 ~ 19067614 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0042221 | response to chemical | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0004871 | obsolete signal transducer activity | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| id | description |
|---|---|
| K09094 | AHRR, AHH; aryl hydrocarbon receptor repressor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2417201 | lncRNA | downstream | 2012 | 19026362 ~ 19027287 (-) | True | G2113770 |
| TU2416907 | lncRNA | downstream | 17664 | 19009732 ~ 19011635 (-) | False | G2113520 |
| TU2416905 | lncRNA | downstream | 18062 | 19009732 ~ 19011237 (-) | False | G2113520 |
| TU2417256 | lncRNA | upstream | 37673 | 19105287 ~ 19105610 (-) | True | G2113823 |
| TU2417266 | lncRNA | upstream | 126194 | 19193808 ~ 19197058 (-) | True | sc61g |
| TU2417304 | lncRNA | upstream | 136443 | 19204057 ~ 19204256 (-) | True | G2113871 |
| TU2417305 | lncRNA | upstream | 137230 | 19204844 ~ 19205108 (-) | True | G2113872 |
| TU2417306 | lncRNA | upstream | 137575 | 19205189 ~ 19205400 (-) | True | G2113873 |
| XM_036967111.1 | mRNA | downstream | 443 | 19027368 ~ 19028856 (-) | True | LOC118944890 |
| XM_021589386.2 | mRNA | downstream | 3317 | 19015141 ~ 19025982 (-) | True | LOC110508676 |
| XR_005040223.1 | mRNA | downstream | 63572 | 18958170 ~ 18965727 (-) | False | LOC118944847 |
| XM_021589382.2 | mRNA | downstream | 82111 | 18945248 ~ 18947188 (-) | True | LOC110508673 |
| XM_036966605.1 | mRNA | downstream | 102286 | 18900272 ~ 18927013 (-) | True | LOC110508176 |
| LOC110508178 | mRNA | upstream | 1421 | 19069035 ~ 19070878 (-) | True | LOC110508178 |
| XM_021589387.2 | mRNA | upstream | 13924 | 19081538 ~ 19095065 (-) | True | LOC110508677 |
| XM_021589388.2 | mRNA | upstream | 48468 | 19116082 ~ 19185326 (-) | False | LOC110508678 |
| XM_021588582.2 | mRNA | upstream | 126194 | 19193808 ~ 19196973 (-) | False | sc61g |
| NM_001160688.2 | mRNA | upstream | 126197 | 19193811 ~ 19197044 (-) | False | sc61g |
| TU2416904 | other | downstream | 19634 | 19007232 ~ 19009665 (-) | False | G2113520 |
| TU2416913 | other | downstream | 20802 | 19007232 ~ 19008497 (-) | False | G2113520 |
| TU2416848 | other | downstream | 62820 | 18958044 ~ 18966479 (-) | False | LOC118944847 |
| TU2416847 | other | downstream | 62820 | 18958110 ~ 18966479 (-) | False | LOC118944847 |
| TU2416849 | other | downstream | 69467 | 18958110 ~ 18959832 (-) | True | LOC118944847 |
| TU2417253 | other | upstream | 48476 | 19116090 ~ 19122056 (-) | True | LOC110508678 |
| TU2419508 | other | upstream | 1791526 | 20859140 ~ 20859530 (-) | True | G2115838 |
| TU2421079 | other | upstream | 2803071 | 21870685 ~ 21871053 (-) | True | G2117313 |
| TU2421081 | other | upstream | 2805602 | 21873216 ~ 21876650 (-) | True | mrps14 |
| TU2421094 | other | upstream | 2875367 | 21942981 ~ 21948258 (-) | False | LOC110508740 |
