Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2419398 |
| length | 1047 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC110508722 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 20840508 ~ 20842019 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
20,838,800
20,839,200
20,839,600
20,840,000
20,840,400
20,840,800
20,841,200
20,841,600
20,842,000
20,842,400
20,842,800
20,843,200
20,843,600
20,844,000
20,844,400
20,844,800
20,845,200
20,845,600
NC_048592.1
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| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2419405 | lncRNA | upstream | 18332 | 20821577 ~ 20822238 (+) | True | G2115748 |
| TU2419350 | lncRNA | upstream | 44914 | 20749113 ~ 20795656 (+) | True | G2115703 |
| TU2419377 | lncRNA | upstream | 47223 | 20786638 ~ 20793347 (+) | True | G2115730 |
| TU2419134 | lncRNA | upstream | 141195 | 20697183 ~ 20699375 (+) | True | G2115529 |
| TU2419118 | lncRNA | upstream | 158726 | 20680742 ~ 20681844 (+) | True | LOC110508716 |
| TU2419527 | lncRNA | downstream | 36352 | 20878355 ~ 20878591 (+) | True | G2115857 |
| TU2419547 | lncRNA | downstream | 57614 | 20899617 ~ 20899817 (+) | True | G2115875 |
| TU2419553 | lncRNA | downstream | 63943 | 20905946 ~ 20906145 (+) | True | G2115881 |
| TU2419670 | lncRNA | downstream | 229259 | 21071262 ~ 21071924 (+) | True | G2115993 |
| TU2419672 | lncRNA | downstream | 231861 | 21073864 ~ 21074314 (+) | True | G2115995 |
| XM_021589463.2 | mRNA | upstream | 27515 | 20808650 ~ 20813055 (+) | True | LOC110508718 |
| XM_021589460.2 | mRNA | upstream | 158685 | 20674599 ~ 20681885 (+) | False | LOC110508716 |
| XM_021589459.2 | mRNA | upstream | 171597 | 20654663 ~ 20668973 (+) | True | LOC110508715 |
| XM_021589451.2 | mRNA | upstream | 188836 | 20637091 ~ 20651734 (+) | False | tgs1 |
| XM_021589452.2 | mRNA | upstream | 188836 | 20637148 ~ 20651734 (+) | True | tgs1 |
| XM_036967080.1 | mRNA | downstream | 119161 | 20961164 ~ 21152939 (+) | False | LOC110508723 |
| XM_036967079.1 | mRNA | downstream | 119162 | 20961165 ~ 21152939 (+) | False | LOC110508723 |
| XM_036967083.1 | mRNA | downstream | 119162 | 20961165 ~ 21152939 (+) | False | LOC110508723 |
| XM_036967082.1 | mRNA | downstream | 119163 | 20961166 ~ 21152939 (+) | False | LOC110508723 |
| XM_036967084.1 | mRNA | downstream | 271260 | 21113263 ~ 21152939 (+) | True | LOC110508723 |
| TU2418949 | other | upstream | 398401 | 20441733 ~ 20442169 (+) | True | G2115369 |
| TU2417581 | other | upstream | 1203817 | 19623468 ~ 19636753 (+) | True | LOC110508695 |
| TU2416973 | other | upstream | 1764152 | 19076077 ~ 19076418 (+) | True | G2113578 |
| TU2416413 | other | upstream | 2172074 | 18667115 ~ 18668496 (+) | True | G2113059 |
| TU2415395 | other | upstream | 2936646 | 17903198 ~ 17903924 (+) | True | G2112127 |
| TU2420043 | other | downstream | 532492 | 21374495 ~ 21375078 (+) | True | G2116347 |
| TU2422383 | other | downstream | 2238413 | 23080416 ~ 23087819 (+) | True | smg7 |
| TU2422409 | other | downstream | 2260406 | 23102409 ~ 23103333 (+) | True | LOC110508761 |
| TU2422439 | other | downstream | 2321863 | 23163866 ~ 23164323 (+) | True | G2118574 |
| TU2423103 | other | downstream | 3259154 | 24101157 ~ 24110710 (+) | False | LOC110508774 |
