Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00055391 |
| length | 766 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | XLOC_028556 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 10771874 ~ 10785654 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007049 | cell cycle | biological_process |
| GO:0051276 | chromosome organization | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:0031262 | Ndc80 complex | cellular_component |
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0044451 | obsolete nucleoplasm part | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:1990234 | transferase complex | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00058078 | lncRNA | downstream | 2010 | 10766014 ~ 10769864 (-) | False | XLOC_028555 |
| TCONS_00058077 | lncRNA | downstream | 2138 | 10766014 ~ 10769736 (-) | False | XLOC_028555 |
| TCONS_00058076 | lncRNA | downstream | 2370 | 10766014 ~ 10769504 (-) | False | XLOC_028555 |
| TCONS_00058075 | lncRNA | downstream | 18933 | 10748977 ~ 10752941 (-) | False | XLOC_028554 |
| TCONS_00058074 | lncRNA | downstream | 19122 | 10748977 ~ 10752752 (-) | False | XLOC_028554 |
| TCONS_00055394 | lncRNA | upstream | 1796 | 10787450 ~ 10789132 (-) | False | XLOC_028555 |
| TCONS_00058099 | lncRNA | upstream | 2882 | 10788536 ~ 10793053 (-) | False | XLOC_028555 |
| TCONS_00055395 | lncRNA | upstream | 5306 | 10790960 ~ 10812236 (-) | False | XLOC_028555 |
| TCONS_00055396 | lncRNA | upstream | 6313 | 10791967 ~ 10812174 (-) | False | XLOC_028555 |
| TCONS_00055397 | lncRNA | upstream | 8012 | 10793666 ~ 10796962 (-) | False | XLOC_028555 |
| TCONS_00055388 | mRNA | downstream | 172812 | 10574822 ~ 10599062 (-) | True | XLOC_028552 |
| TCONS_00055386 | mRNA | downstream | 862503 | 9901116 ~ 9909371 (-) | False | XLOC_028550 |
| TCONS_00055385 | mRNA | downstream | 880000 | 9880647 ~ 9891874 (-) | True | XLOC_028549 |
| TCONS_00055383 | mRNA | downstream | 904089 | 9854075 ~ 9867785 (-) | False | XLOC_028548 |
| TCONS_00055398 | mRNA | upstream | 25836 | 10811490 ~ 10826575 (-) | False | XLOC_028555 |
| TCONS_00055399 | mRNA | upstream | 27607 | 10813261 ~ 10835620 (-) | False | XLOC_028555 |
| TCONS_00055400 | mRNA | upstream | 28256 | 10813910 ~ 10826575 (-) | True | XLOC_028555 |
| TCONS_00055401 | mRNA | upstream | 140517 | 10926171 ~ 10931729 (-) | True | XLOC_028557 |
| TCONS_00055402 | mRNA | upstream | 163735 | 10949389 ~ 10958074 (-) | True | XLOC_028558 |
| TCONS_00055389 | other | downstream | 110197 | 10661561 ~ 10661677 (-) | True | XLOC_028553 |
| TCONS_00055328 | other | downstream | 2183966 | 8587787 ~ 8587908 (-) | True | XLOC_028518 |
| TCONS_00055327 | other | downstream | 2630408 | 8141349 ~ 8141466 (-) | True | XLOC_028515 |
| TCONS_00055313 | other | downstream | 2895944 | 7870895 ~ 7875930 (-) | False | XLOC_028507 |
| TCONS_00055311 | other | downstream | 2896114 | 7870736 ~ 7875760 (-) | False | XLOC_028507 |
| TCONS_00055432 | other | upstream | 821104 | 11606758 ~ 11606855 (-) | True | XLOC_028574 |
| TCONS_00055433 | other | upstream | 822542 | 11608196 ~ 11608283 (-) | True | XLOC_028575 |
| TCONS_00055457 | other | upstream | 1489460 | 12275114 ~ 12286066 (-) | True | XLOC_028592 |
| TCONS_00055464 | other | upstream | 1627765 | 12413419 ~ 12433016 (-) | True | XLOC_028596 |
| TCONS_00055465 | other | upstream | 1810026 | 12595680 ~ 12595804 (-) | True | XLOC_028597 |
