Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00055419 |
| length | 3776 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 10 |
| gene id | XLOC_028569 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 11144600 ~ 11165961 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0043009 | chordate embryonic development | biological_process |
| GO:0048813 | dendrite morphogenesis | biological_process |
| GO:0018216 | peptidyl-arginine methylation | biological_process |
| GO:0051260 | protein homooligomerization | biological_process |
| GO:0016571 | histone methylation | biological_process |
| GO:0048666 | neuron development | biological_process |
| GO:0032259 | methylation | biological_process |
| GO:0030917 | midbrain-hindbrain boundary development | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0098753 | anchored component of the cytoplasmic side of the plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0035241 | protein-arginine omega-N monomethyltransferase activity | molecular_function |
| GO:0035242 | protein-arginine omega-N asymmetric methyltransferase activity | molecular_function |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | molecular_function |
| GO:0016740 | transferase activity | molecular_function |
| GO:0008168 | methyltransferase activity | molecular_function |
| GO:0042802 | identical protein binding | molecular_function |
| GO:1904047 | S-adenosyl-L-methionine binding | molecular_function |
| GO:0016273 | arginine N-methyltransferase activity | molecular_function |
| GO:0016274 | protein-arginine N-methyltransferase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-7791 | Enables arginine N-methyltransferase activity. Acts upstream of or within dendrite morphogenesis and midbrain-hindbrain boundary development. Predicted to be anchored component of the cytoplasmic side of the plasma membrane. Predicted to be active in plasma membrane. Is expressed in brain; eye; and somite. Orthologous to human PRMT8 (protein arginine methyltransferase 8). |
| ensembl_id | ENSDART00000059489 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00055416 | lncRNA | downstream | 20968 | 11124613 ~ 11125650 (-) | False | XLOC_028568 |
| TCONS_00055415 | lncRNA | downstream | 21452 | 11124613 ~ 11125166 (-) | False | XLOC_028568 |
| TCONS_00058100 | lncRNA | downstream | 334331 | 10793666 ~ 10812287 (-) | False | XLOC_028555 |
| TCONS_00055396 | lncRNA | downstream | 334444 | 10791967 ~ 10812174 (-) | False | XLOC_028555 |
| TCONS_00055421 | lncRNA | upstream | 13898 | 11179509 ~ 11186936 (-) | True | XLOC_028570 |
| TCONS_00055422 | lncRNA | upstream | 79721 | 11245332 ~ 11248285 (-) | True | XLOC_028571 |
| TCONS_00055426 | lncRNA | upstream | 237080 | 11402691 ~ 11404177 (-) | True | XLOC_028572 |
| TCONS_00055430 | lncRNA | upstream | 411234 | 11576845 ~ 11580944 (-) | False | XLOC_028573 |
| TCONS_00055434 | lncRNA | upstream | 445107 | 11610718 ~ 11637236 (-) | False | XLOC_028576 |
| TCONS_00055417 | mRNA | downstream | 14001 | 11124614 ~ 11132617 (-) | True | XLOC_028568 |
| TCONS_00055414 | mRNA | downstream | 23980 | 11112580 ~ 11122638 (-) | True | XLOC_028567 |
| TCONS_00055413 | mRNA | downstream | 39762 | 11099041 ~ 11106856 (-) | True | XLOC_028566 |
| TCONS_00055412 | mRNA | downstream | 48079 | 11084209 ~ 11098539 (-) | True | XLOC_028565 |
| TCONS_00055411 | mRNA | downstream | 64657 | 11079058 ~ 11081961 (-) | True | XLOC_028564 |
| TCONS_00055423 | mRNA | upstream | 235407 | 11401018 ~ 11403859 (-) | False | XLOC_028572 |
| TCONS_00055424 | mRNA | upstream | 235510 | 11401121 ~ 11404967 (-) | False | XLOC_028572 |
| TCONS_00055425 | mRNA | upstream | 235513 | 11401124 ~ 11403811 (-) | False | XLOC_028572 |
| TCONS_00055427 | mRNA | upstream | 407957 | 11573568 ~ 11580948 (-) | False | XLOC_028573 |
| TCONS_00055428 | mRNA | upstream | 407957 | 11573568 ~ 11594202 (-) | False | XLOC_028573 |
| TCONS_00055389 | other | downstream | 484941 | 10661561 ~ 10661677 (-) | True | XLOC_028553 |
| TCONS_00055328 | other | downstream | 2558710 | 8587787 ~ 8587908 (-) | True | XLOC_028518 |
| TCONS_00055327 | other | downstream | 3005152 | 8141349 ~ 8141466 (-) | True | XLOC_028515 |
| TCONS_00055313 | other | downstream | 3270688 | 7870895 ~ 7875930 (-) | False | XLOC_028507 |
| TCONS_00055311 | other | downstream | 3270858 | 7870736 ~ 7875760 (-) | False | XLOC_028507 |
| TCONS_00055432 | other | upstream | 441147 | 11606758 ~ 11606855 (-) | True | XLOC_028574 |
| TCONS_00055433 | other | upstream | 442585 | 11608196 ~ 11608283 (-) | True | XLOC_028575 |
| TCONS_00055457 | other | upstream | 1109503 | 12275114 ~ 12286066 (-) | True | XLOC_028592 |
| TCONS_00055464 | other | upstream | 1247808 | 12413419 ~ 12433016 (-) | True | XLOC_028596 |
| TCONS_00055465 | other | upstream | 1430069 | 12595680 ~ 12595804 (-) | True | XLOC_028597 |
