RNA id: XM_036966927.1


Basic Information

Item Value
RNA id XM_036966927.1
length 3210
RNA type mRNA
GC content 0.45
exon number 2
gene id nmur1b
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32581133 ~ 32589881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tctaagtgaccccaaacttttgaacggcagtgtaaatccgagacactccactTAGTAAGATATGTCaagtttcatatggtatgtattcatttgtggatgtccatcacacATTTTATATAATATGTTCCCGAATTACAATTACAATTATATTTTTTTCGtattgcaattcgtacaatatctTACGAATTTACAAATAAGTATGACATGTTACGAGtcccaatttgttgtggctaacgttagctaggtgactAGGTCGCTAAAGccaacgttagccacaacaaattggaactCGTAACATGTCATACCAGGCTGCGTCATAACAcctcataaccatgtcataacagctgTCATAGCCTGTCGTAAATAACATTGTAACACTGTTTTCACACAGACGTTTTATTGAATAAAATGTACATGTTAATGTTGTGCCATACAGTATATTGTGATATTTTATAacctggttatgacacctacataagtgtcaaaacccacaaaaacctaccacacaaggcaaaccATTCAATTACACCAAACGTGTATGTTAGATAACATTTCCTGGAATTAGCATTGTAATTGCACACACATTGATATTAGACATACAGTACCTACCCCAATGATCatttgctgatgactgggatgaattcAGAAGCGATCCAAGACACCCTCATTGTGACATATGACTGACATATGAGCATGCACGTAATAGGTCACGGTCATAATCACCAACTGCCAAATGTTGTTTGTTCAGACTGCAGCTAAACTGTCACCTACACTGAACCAAGCAAAACATTCCATTCCTATTATTTCCATTCTCCCCCTCAGGTGTTGTGTCCCCATAAACCAATGGCTCAGTATAACTGTTCCTCTCTGGGTCTGCCTGCCACCACTCCTGACCAGCTTGGTTGGAATGTGTCCTGGGCCCTGGGCAACGTCAGTGCTGATGACATGGAGGACATGTGCCTGAATCGGAGTCAGTACCTGGAGAAGTTTCTAGGCTTCCAGCGGTCGCCTGTTTTCCTGCCGGTTTGCATTACCTTCCTCATCATCTTCGCTGTGGGAGTGTTAGGTAACGTGCTCACCTGCGCCGTCATCGTGCGCTACAAGGTGATGCGGACGCCAACTAATTACTACCTGTTCAGTCTGGCCGTGTCCGACTTACTGGTCCTAGTCCTGGGTATGCCGTTGGAACTCTACGAGATGTGGAGCAACTACCCGTTCCTGTTTGGCGCTGGTGGCTGTTACTTCAAGACCTTCCTGTTTGAGACGGTCTGCTTTGCCTCCATTCTCAATGTAACGGCACTGAGCGTGGAGCGCTACATCGCCGTGTTACACCCGCTGAAAGTCAAGCACGTGGCCACGCACGCCCATGCCAAGCGTGTCATCCTGATGCTGTGGGTCATGTCCATGGTGTGCGCCATGCCAAACACCAGCCTCCACGGTTTGGCCGTGTTGAGGCCTCGATTTGGCCGCCAATTCCCAGAGTCGGCCGTCTGCATGATGGTCAAGCCCATGTGGATGTACAACCTGATTATTCAAGTGACCACGCTGGTCTTCTTCCTGATGCCTATGCTCACCATCACTGTGCTGTACCTGCGCATCGGCCTGCAGCTCAGGATGGAGAAGGGCATGCAGGGGGTCGGGATCGGGCAGGGTTTTGGTCCTGATCGCCACTGCAGGCACCAGCAGAGGGCGCGCCACAGACAAGTCACCAAGATGCTTTGCGTACTGGTGATTGTTTTTGGCATCTGCTGGGCTCCCTTCCACATTGACCGTCTCATGTGGAGCTTCATAAACTCCTGGACTGGCCACCACCACCTGGTCTTCGAGTACGTCCACGTCGTCTCCGGGGTCTTCTTCTACCTCAGCTCGGCGGTCAACCCCATCCTCTACAACCTCATGTCCACCCGCTTCCGGGAGATGTTCCAGCAGATCACGTGTCGCTCCGGCCTCTGTGGCGGCGACGTGCGCATGCTGAACGCCCGTAGCACCCAAATGACCCTACGTAGTATCGTCTATGAGAAGCCGCAACATAATGGGACCCCAGAGAGAATCACCccagacagagaggagcagaaTGTGTACGTAAACCCCCACGGCCAGCATGTATATGGCAATACAAGCCCTGATTAGATAGAGGGTGATGGGGTGGGGGTACCAAAACAATGTATAAACATTAACTAAGATTGGGTACCACAATGAGAAAATGTGTAGCTGATTGAACGTGTACAGCGAGAGTTTGGATGGAAAGCAACAGAGTTGAAGTTGAAGTTTTGCCCTAGACTTTGGATTTAAAGTGGAATTCTCACTGGGCGATACCAAAATTAACCAGGATGAGGTACCAAAATGTAATTATTAAATCGATCACTGATTGAATGTGTAGCAGGTAGGTATTTATTGGGATGACTCATGTACTGAAGGCAGCTTTGTAGAGTAGGCACTAGTTGGCACAGCcacaaaatcagattttaaacctaaccctaaccaccctactaaccttatgcctaaccctaacatatagccaattttgactttgcagccggcccatctagtggaaatcgctTAGCTCTGCCTCCAGAACACGACATCtcaataaacatcaacctgcgACTGTGTACAGCCAGAGTGGATAGAGAGAAAGTAATAAAGTTTAGTCCTTCGACTTTGAATATAAAATGGTtttcccacacacacatacaattagtTATATGTGGGATATTCAAATGTTATATTCTGTGCAGATGAAAGTGTTCTTCAACCGGATATTAATATTCAGATTGAACACATTATTTATATAAGCTTATTTTGAAAAATAAACAATACCCAGCTTTGTAAAATATCTTATTAATATAATACTGATCTTATTCTGTTCATATGTTTCAGGAGACACGATTAAATTGTAACTGTCTTCTTCCATGCGTTATTGTACTCGGTACACTATCAAAATCCCACTCACTATGAATGTATATCACAGGCAGTATTGAAAGTATATGGGAGATAGAAATGTCATGACACAGAATTGGAAAATGTGATGTACGTATGACATCCTTAAAGAAATGGAAAATGTGATGTACGTATGACATCCTTAAAGAAATGGAAAATGTGATGTACGTATGACATCCTTAAAGAAATGGAAAATGTGATGTACGTATGACATCCTTAAAGAAAGGGAAAAGGGGCAGGATTTCCATCAGTAGTAAGTAAATACGTATG

Function

GO: NA

KEGG:

id description
K05052 NMUR1; neuromedin U receptor 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2434551 lncRNA upstream 22621 32563462 ~ 32563697 (+) True G2129242
TU2434039 lncRNA upstream 227972 32358142 ~ 32358346 (+) True G2128835
TU2434038 lncRNA upstream 228616 32357478 ~ 32357702 (+) True G2128834
TU2434036 lncRNA upstream 243679 32342428 ~ 32342639 (+) True G2128832
TU2434018 lncRNA upstream 271702 32312075 ~ 32314616 (+) True G2128818
TU2434572 lncRNA downstream 2013 32591894 ~ 32592146 (+) True G2129262
TU2434584 lncRNA downstream 21132 32611013 ~ 32611763 (+) True G2129271
TU2434633 lncRNA downstream 42169 32632050 ~ 32632657 (+) True G2129310
TU2434679 lncRNA downstream 132272 32722153 ~ 32722430 (+) True G2129353
TU2434681 lncRNA downstream 136700 32726581 ~ 32726881 (+) True G2129355
XM_036966101.1 mRNA upstream 182825 32374691 ~ 32403493 (+) False LOC110508222
XM_036966102.1 mRNA upstream 182825 32374691 ~ 32403493 (+) True LOC110508222
XM_021589935.2 mRNA upstream 217403 32363038 ~ 32368915 (+) False LOC110509002
XR_002471388.2 mRNA upstream 217403 32363038 ~ 32368915 (+) True LOC110509002
XR_005040314.1 mRNA upstream 313341 32272798 ~ 32272977 (+) True LOC118944910
XM_021589939.2 mRNA downstream 24686 32614567 ~ 32622807 (+) False LOC110509005
XM_036966768.1 mRNA downstream 24688 32614569 ~ 32622807 (+) False LOC110509005
XM_021589938.2 mRNA downstream 24692 32614573 ~ 32622807 (+) True LOC110509005
XM_021589942.2 mRNA downstream 83864 32673745 ~ 32679940 (+) False pfn2l
XM_021589941.2 mRNA downstream 83865 32673746 ~ 32681853 (+) False pfn2l
TU2433942 other upstream 311938 32269318 ~ 32274380 (+) False G2128753
TU2433943 other upstream 311938 32269318 ~ 32274380 (+) False G2128753
TU2433944 other upstream 311938 32269318 ~ 32274380 (+) False G2128753
TU2433832 other upstream 530663 32053769 ~ 32055655 (+) True LOC110508984
TU2433828 other upstream 531227 32053769 ~ 32055091 (+) False LOC110508984
TU2434599 other downstream 41408 32631289 ~ 32700844 (+) False pfn2l
TU2434597 other downstream 83922 32673803 ~ 32700844 (+) True pfn2l
TU2434698 other downstream 159047 32748928 ~ 32749568 (+) True G2129371
TU2434604 other downstream 193987 32783868 ~ 32803922 (+) False zbtb41
TU2434606 other downstream 195090 32784971 ~ 32803922 (+) True zbtb41

Expression Profile