RNA id: XM_021588655.2


Basic Information

Item Value
RNA id XM_021588655.2
length 447
RNA type mRNA
GC content 0.48
exon number 3
gene id LOC110508225
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32962496 ~ 32964152 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ATGGATCTCAACACTCTTTTCAAGGGTAGATTTTGTTGCTTTCCCAAGGACCCGCTTGAAGAGGCTGAGACTTGGGGAGAGTCTGTGGACAAACTCCTGGGTTGTAAACCCGGGCAGGCGGCTTTCAGAGAATTCCTTAAATCAGAGTATAGTGAGGAGAATATTCTGTTTTGGCTGGCCTGTGAGGAGTACAAGAACATCACGTCTCTTCCAGAGATGATCTCATCTGCAAACAGGATCTACTCAGAGTTTGTGGAATGTGAAGCACCGAGACAGATCAATATTGATTGTGGGACCAGAGAAAATATCACCAAGAACATCTCTCAGCCGAGCCTGACCTCTTTCGACACGGCACAGAAGTTGATCTACAGTCTGATGGCCAGGGATTGTTACCCACGATTCCTCAAGTCAGACGTCTACCAGGATATGCTGAGGGGAGCAAGGTGA

Function

GO: NA

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2435400 lncRNA downstream 89578 32870950 ~ 32872918 (-) True G2129961
TU2435403 lncRNA downstream 127355 32830017 ~ 32835141 (-) True G2129964
TU2435544 lncRNA downstream 135549 32826132 ~ 32826947 (-) True G2130089
TU2435541 lncRNA downstream 136930 32824393 ~ 32825566 (-) False G2130088
TU2435622 lncRNA upstream 49227 33013379 ~ 33019915 (-) True G2130162
TU2435704 lncRNA upstream 141720 33105872 ~ 33107219 (-) True G2130229
TU2435711 lncRNA upstream 157014 33121166 ~ 33121566 (-) True G2130236
TU2435716 lncRNA upstream 167444 33131596 ~ 33131887 (-) True G2130241
TU2435740 lncRNA upstream 203774 33167926 ~ 33168125 (-) True G2130258
NM_001165154.2 mRNA downstream 5190 32954950 ~ 32957306 (-) True rgs1
XM_021589963.2 mRNA downstream 13984 32944542 ~ 32948512 (-) True LOC110509023
XM_036966376.1 mRNA downstream 25326 32919920 ~ 32937170 (-) True ro60
XM_036966377.1 mRNA downstream 30336 32919920 ~ 32932160 (-) False ro60
XM_021589960.2 mRNA downstream 42882 32875439 ~ 32919614 (-) True LOC110509019
NM_001124640.1 mRNA upstream 4797 32968949 ~ 32973868 (-) True rgs18
XM_036966337.1 mRNA upstream 185853 33150005 ~ 33153414 (-) True LOC118944830
XM_036966876.1 mRNA upstream 314402 33278554 ~ 33307172 (-) False LOC110508227
XM_036966878.1 mRNA upstream 314402 33278554 ~ 33307172 (-) False LOC110508227
XM_036966880.1 mRNA upstream 314402 33278554 ~ 33307172 (-) False LOC110508227
TU2434271 other downstream 732282 32228406 ~ 32230214 (-) True LOC110508997
TU2434163 other downstream 797474 32062049 ~ 32165022 (-) False asip2b
TU2434159 other downstream 797474 32157032 ~ 32165022 (-) False asip2b
TU2434160 other downstream 797474 32157032 ~ 32165022 (-) False asip2b
TU2434125 other downstream 933938 32023058 ~ 32028558 (-) False LOC110508982
TU2435888 other upstream 434395 33398547 ~ 33399084 (-) True G2130393
TU2436339 other upstream 1076054 34040206 ~ 34066665 (-) True G2130771
TU2436349 other upstream 1077286 34041438 ~ 34068073 (-) True G2130780
TU2436338 other upstream 1077417 34041569 ~ 34042565 (-) False LOC110509052
TU2436347 other upstream 1080538 34044690 ~ 34058270 (-) True LOC110509052

Expression Profile