RNA id: NM_001124640.1


Basic Information

Item Value
RNA id NM_001124640.1
length 1184
RNA type mRNA
GC content 0.45
exon number 5
gene id rgs18
representative True

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 32968949 ~ 32973868 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GGGTTAAAGGAGCACTAAGAACTGATTGTGCTCTGCTTTCATATATGCTAAAGTTAGAAGGAAGCTAGAATGGAAACACTTGTTTTTCTGTTTCCTCAATTGAACTTTTTTGCCCCAAAAGAGGAAGCATATTTCAAAATGCTCTGTCCTGAGGACTTGTTGGCACCGAGAATGAAAGCTAGTCATTTCAGATTGAAAGACAAGAAGAGCCGACTGAGCCTTCTGCTGACCAAGTCAGGCTCCCATGAAAACATCAGTCCAGGAAAAAAGACAGCCACCACCAACAACAACATCTCACCAGAGGCAGCGTTGAGATGGAGCGACTCCTTTGAAGATCTGATCAGACATTCAGACGGAGTGGAGTCGTTCTCTCAGTTCCTCAGGACAGAGTTCAGTGAGGAGAACATTGAGTTCTGGTTGGCCTGTGAGGAGTACAAGACCATCGACTCGGAAATCCGGCTCATCTCCAAAGCCAAGCACATGTATTCTGTCTTCATTGAAGCCGAGGCCCCAaaagagGTCAACATCGACTATGCCTCCAAGGTGGCCATCCAGAAGACCATGGCTTCGCCGACGAATACCTGCTTCGATGCGGCGCAGAGCAAAGTCTACAGCCTGATGAAAAAAGACTGCTACCCAAGGTTCCTCACGTCAGACATCTACCTGCACCTCACCAAGAGAAAAGGCCCCGGGACCACCATGTACCGCCGGAGGTCACGGTCCTGCGTTTTCAATGAGCCGCGAGGGGAGGCCACCAGCGACTCCTCTGACTGGTTGTAGCATCGTAAGCCGAGAGTAGcacaatacacacactcacacacacacacagacacacagacacacacacagacacacacgcaccctTCCAAATTCCCTTGCAGTGCAATGCCTGTCGCTGACTAGTTGTGTGATTGTGGAAAGCTGTACCTTTTTAATGAGAGACTTTCTGAAGAGATTTGACTTTACAGCTATCAATTAAAATGTTCCCCATCTAGACAGCAAACATGAACAGACCGTGTAAGAATACTAATATGCAATATTCATCTTGTTTACCGTTAAATGTCTTGCCACTGCTTGTATTAATTCaataatttattataataatatgtTATGTTGGCTTTTAGTTGTAACTTGTATATATTGTCTGGAGAGTAATTATTGGAATAAACAACATattataaaaa

Function

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2435400 lncRNA downstream 96031 32870950 ~ 32872918 (-) True G2129961
TU2435403 lncRNA downstream 133808 32830017 ~ 32835141 (-) True G2129964
TU2435544 lncRNA downstream 142002 32826132 ~ 32826947 (-) True G2130089
TU2435541 lncRNA downstream 143383 32824393 ~ 32825566 (-) False G2130088
TU2435622 lncRNA upstream 39511 33013379 ~ 33019915 (-) True G2130162
TU2435704 lncRNA upstream 132004 33105872 ~ 33107219 (-) True G2130229
TU2435711 lncRNA upstream 147298 33121166 ~ 33121566 (-) True G2130236
TU2435716 lncRNA upstream 157728 33131596 ~ 33131887 (-) True G2130241
TU2435740 lncRNA upstream 194058 33167926 ~ 33168125 (-) True G2130258
XM_021588655.2 mRNA downstream 4797 32962496 ~ 32964152 (-) True LOC110508225
NM_001165154.2 mRNA downstream 11643 32954950 ~ 32957306 (-) True rgs1
XM_021589963.2 mRNA downstream 20437 32944542 ~ 32948512 (-) True LOC110509023
XM_036966376.1 mRNA downstream 31779 32919920 ~ 32937170 (-) True ro60
XM_036966377.1 mRNA downstream 36789 32919920 ~ 32932160 (-) False ro60
XM_036966337.1 mRNA upstream 176137 33150005 ~ 33153414 (-) True LOC118944830
XM_036966876.1 mRNA upstream 304686 33278554 ~ 33307172 (-) False LOC110508227
XM_036966878.1 mRNA upstream 304686 33278554 ~ 33307172 (-) False LOC110508227
XM_036966880.1 mRNA upstream 304686 33278554 ~ 33307172 (-) False LOC110508227
XM_036966881.1 mRNA upstream 304686 33278554 ~ 33307172 (-) False LOC110508227
TU2434271 other downstream 738735 32228406 ~ 32230214 (-) True LOC110508997
TU2434163 other downstream 803927 32062049 ~ 32165022 (-) False asip2b
TU2434159 other downstream 803927 32157032 ~ 32165022 (-) False asip2b
TU2434160 other downstream 803927 32157032 ~ 32165022 (-) False asip2b
TU2434125 other downstream 940391 32023058 ~ 32028558 (-) False LOC110508982
TU2435888 other upstream 424679 33398547 ~ 33399084 (-) True G2130393
TU2436339 other upstream 1066338 34040206 ~ 34066665 (-) True G2130771
TU2436349 other upstream 1067570 34041438 ~ 34068073 (-) True G2130780
TU2436338 other upstream 1067701 34041569 ~ 34042565 (-) False LOC110509052
TU2436347 other upstream 1070822 34044690 ~ 34058270 (-) True LOC110509052

Expression Profile