Item | Value |
---|---|
RNA id | TU2436815 |
length | 494 |
lncRNA type | sense_over |
GC content | 0.39 |
exon number | 1 |
gene id | LOC110509056 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048592.1 |
NCBI id | CM023246.2 |
chromosome length | 43716683 |
location | 34304706 ~ 34321590 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
id | name | namespace |
---|---|---|
GO:0006508 | proteolysis | biological_process |
GO:0016021 | integral component of membrane | cellular_component |
GO:0004252 | serine-type endopeptidase activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU2436832 | lncRNA | downstream | 20696 | 34283833 ~ 34284032 (-) | True | G2131219 |
TU2436829 | lncRNA | downstream | 23423 | 34281096 ~ 34281305 (-) | True | G2131216 |
TU2436828 | lncRNA | downstream | 25237 | 34279161 ~ 34279491 (-) | True | G2131215 |
TU2436820 | lncRNA | downstream | 39127 | 34263822 ~ 34265601 (-) | True | G2131211 |
TU2436818 | lncRNA | downstream | 42338 | 34261775 ~ 34262390 (-) | True | G2131210 |
TU2436848 | lncRNA | upstream | 16680 | 34321901 ~ 34322185 (-) | True | G2131234 |
TU2436816 | lncRNA | upstream | 70691 | 34375912 ~ 34379555 (-) | True | G2131208 |
TU2436900 | lncRNA | upstream | 92496 | 34397717 ~ 34397987 (-) | True | G2131279 |
TU2436903 | lncRNA | upstream | 95735 | 34400956 ~ 34401502 (-) | True | G2131282 |
TU2436904 | lncRNA | upstream | 98415 | 34403636 ~ 34404048 (-) | True | G2131283 |
XM_021590021.2 | mRNA | downstream | 4100 | 34284268 ~ 34300628 (-) | True | vcam1a |
XM_021590015.2 | mRNA | downstream | 35711 | 34258195 ~ 34269017 (-) | False | zgc:110366 |
XM_036967152.1 | mRNA | downstream | 35711 | 34258195 ~ 34269017 (-) | False | zgc:110366 |
XM_021590014.2 | mRNA | downstream | 35711 | 34258200 ~ 34269017 (-) | True | zgc:110366 |
XM_036967154.1 | mRNA | downstream | 35737 | 34258195 ~ 34268991 (-) | False | zgc:110366 |
XM_036966668.1 | mRNA | upstream | 116951 | 34422172 ~ 34481857 (-) | False | LOC110509050 |
XM_036966669.1 | mRNA | upstream | 120386 | 34425607 ~ 34481859 (-) | True | LOC110509050 |
XM_036966882.1 | mRNA | upstream | 266812 | 34572033 ~ 34604132 (-) | False | LOC110508232 |
XM_036966883.1 | mRNA | upstream | 266812 | 34572033 ~ 34604132 (-) | True | LOC110508232 |
XM_036966648.1 | mRNA | upstream | 408046 | 34713267 ~ 34728197 (-) | True | LOC110509072 |
TU2436349 | other | downstream | 236655 | 34041438 ~ 34068073 (-) | True | G2130780 |
TU2436339 | other | downstream | 238063 | 34040206 ~ 34066665 (-) | True | G2130771 |
TU2436347 | other | downstream | 246458 | 34044690 ~ 34058270 (-) | True | LOC110509052 |
TU2436338 | other | downstream | 262163 | 34041569 ~ 34042565 (-) | False | LOC110509052 |
TU2435888 | other | downstream | 905644 | 33398547 ~ 33399084 (-) | True | G2130393 |
TU2437325 | other | upstream | 180648 | 34485869 ~ 34486176 (-) | True | G2131621 |
TU2437347 | other | upstream | 211301 | 34516522 ~ 34518129 (-) | False | G2131641 |
TU2437349 | other | upstream | 211301 | 34516522 ~ 34518129 (-) | True | G2131641 |
TU2438804 | other | upstream | 1700268 | 36005489 ~ 36017832 (-) | False | lyrm4 |
TU2438803 | other | upstream | 1710841 | 36016062 ~ 36017832 (-) | True | lyrm4 |